Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele32g0259 ATGGATTATTCCAACTTGAATATGAGCAATTCATACCCTGAAGATTACGAAGGAGTAACTGTTACCGGCTTTGAAGTTCCGAAGTCTCCCGATTCAAGTTATAACAACGTGTATCCTGGGAATGAAGATGACGCTCGTGATCCACCCACAGTTCCTCCGCATTTGCATCATACCTTGCTCCATTATCCTGCCAGTAGAAGCAATTCAGGGACTCTTCCCCCGCCTCAGGACGTGATTCTCAATCATCTTTATATTGAGAACAGAGAGGCTCCAAGGTCTGTGGTGGCAGTAGGATTTACTCATCGCTTCCGATCAAAATATGTTACTGTTGTGGTTTACAAACCAGTCCAAAGAGGCAGTAGTACGAGCATGTGA 375 0.448 MDYSNLNMSNSYPEDYEGVTVTGFEVPKSPDSSYNNVYPGNEDDARDPPTVPPHLHHTLLHYPASRSNSGTLPPPQDVILNHLYIENREAPRSVVAVGFTHRFRSKYVTVVVYKPVQRGSSTSM 124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele32g0259 124 Gene3D - 21 116 - -
Lele32g0259 124 SMART AMPKBI_2 27 116 IPR006828 GO:0005515
Lele32g0259 124 PANTHER SNF1-RELATED PROTEIN KINASE REGULATORY SUBUNIT BETA-1 7 118 IPR043554 -
Lele32g0259 124 MobiDBLite consensus disorder prediction 22 54 - -
Lele32g0259 124 SUPERFAMILY AMPKBI-like 21 116 IPR037256 -
Lele32g0259 124 Pfam 5'-AMP-activated protein kinase beta subunit, interaction domain 46 115 IPR006828 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele32g0259 Lele-ChrLele32 1623084 1623544 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele29g0276 29 1646074 1646536 Lele32g0259 32 1623084 1623544 hybridization
Lele30g1138 30 14337771 14338210 Lele32g0259 32 1623084 1623544 hybridization