Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele30g1138 ATGAGCAATTCATCCCCTGAAGATTACGAAGGAGTAACTGTTACCGGCTTTGAAGTCCCGAAGTCTCCCGATTCGAGTTATAACAACGTGTATCCTGGAAATGAAGATGACGCTCGTGATCCACCCACAGTTCCTCCTCATTTGCAGCATACCTTGCTCCATTATCCTGCCAGTAGAAGCAATTCAGGGACTCTTCCCCCGCCTCAGGACGTGATTCTCAATCATCTTTATATTGAGAACAGAGAGGCTCCAAGATCTGTGGTGGCATTAGGATTTACTCATCGCTTCCGATCAAAATATGTTACTGTTGTGCTTTACAAACCAGTCCAAAGAGGCAGTAGTACGAGCATGTGA 354 0.4576 MSNSSPEDYEGVTVTGFEVPKSPDSSYNNVYPGNEDDARDPPTVPPHLQHTLLHYPASRSNSGTLPPPQDVILNHLYIENREAPRSVVALGFTHRFRSKYVTVVLYKPVQRGSSTSM 117
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele30g1138 117 SUPERFAMILY AMPKBI-like 14 109 IPR037256 -
Lele30g1138 117 MobiDBLite consensus disorder prediction 1 49 - -
Lele30g1138 117 Pfam 5'-AMP-activated protein kinase beta subunit, interaction domain 39 108 IPR006828 GO:0005515
Lele30g1138 117 SMART AMPKBI_2 20 109 IPR006828 GO:0005515
Lele30g1138 117 PANTHER SNF1-RELATED PROTEIN KINASE REGULATORY SUBUNIT BETA-1 5 111 IPR043554 -
Lele30g1138 117 Gene3D - 14 109 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele30g1138 Lele-ChrLele30 14337771 14338210 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele30g1138 30 14337771 14338210 Lele31g1274 31 18893217 18893680 hybridization
Lele30g1138 30 14337771 14338210 Lele32g0259 32 1623084 1623544 hybridization