Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele32g0215 ATGATCTCGTTTTTCACCCAACAAGAGGGAGAGAGGTTAGAGAGAGATGAATCTGGCTGTCTTCTCAATGCAAAAGACAGGGAGGGAGGTTTGATGGCGCCCACCTCTTTAGTAGTTGCCGTGTGCCCCGTCATTAGCCCATTGACTTTAGAGACAGAAGACTGGTGGACAAGAATTAATTGGTGGACTTTACTGTCCATAGGAATTTATTCGGAAGCCAGCTTTGAAGCAGAGCTTTCAGTACCAGAGATTGCTTCAAGTGAAGGGGGTCCTGAAACATTTCGTGGAGTTTTTATCCGTGCCCCGGCAATACCTGAAGTTGGAAAAGAAGTTCAAGGGCTAGCTGATTATTTTGCCCCATCTAATGGCTTATTAGAGGACTTTGGAGATCAACCGCAGTGGCCATTGCTGCCACTGAAGGAGAAGGCAATGGAAAAGGCATGGAGAAGAAGGACAAGGAGAAACAAAAGAAACAAGAAACAAGATAAGAAAGAAAAGGAGAAGGAGAAGAAACAAGATAAGAAACAAAAGGAAAAAGAGAAAAAGTCAAAGAAGGGATCAAAGGATGAAGCGTCAAATTATAAGCAGCTGTCGCCTCTGCCATCAGGACAAGAACGAGCTTTCTGCCTTGCACAAGGATCTTGTTATTATAAGACCCTTACTTGTCCAGCCGAGTGCACACATAGAAAGCCCAAGAAGAACAAGCAGCAAAAAGGTTGCTTCCTTGACTGCAGCAGCAAATGCGAAGCCACCTGCAAGTATAGAAAAGCCAACTGTGATGGCTATGGATCTCTCTGCTACGACCCACGATTTGTTGGTGGTGACGGTGTCATGTTCTACTTCCATGGAGCCAAAGGCGGCAACTTTGCCATCGTCTCTGACGACAGTCTCCAAATCAACGCACATTTCATTGGATCTAGACCCCAAGGAAGGACTCGTGACTACACATGGGTGCAAGCCATTTCTGTCATGTTCGACACACACACACTCTTTGTGGCAGCGAACAGAGTATCTCAATGGGACGATAACGTCGACTCTTTGATGGTACAATGGGATGGTGAAACAGTGAGCATTCCTACTGATGATGATGCTGAATGGAAGAGTAACAGTGAAGAGAGAGAAGTGGAAGTGGAAAGAACAGATGAAACCAACAGCGTGAGAGTGAAAGTTTCAGGCTTGTTAGAGGTGGATATTAAGGTAAGACCCATTGGAGAAGAAGAAAACAGAGTGCATAATTATCAGTTGCCTGCAGGTGATGCTTTTGCTCATTTGGAGACACAATTCAGATTCAAGAACCTCACAGATTTAGTTGAAGGAGTTTTGGGTAAGACTTACAGGCCAAACTACGAAAGCCCAGTGAAGAGAGGCTTTCCTATGCCAATGATGGGTGGAGAGGACAGATACAGAACTCCTTCTCTGTTTTCACCTTTCTGCAAAGTTTGCAGGTTCCAGAGATCATCTGGGTTTGCTGCTGATGAAGGACTCCTCGCTCAATACTGA 1500 0.4513 MISFFTQQEGERLERDESGCLLNAKDREGGLMAPTSLVVAVCPVISPLTLETEDWWTRINWWTLLSIGIYSEASFEAELSVPEIASSEGGPETFRGVFIRAPAIPEVGKEVQGLADYFAPSNGLLEDFGDQPQWPLLPLKEKAMEKAWRRRTRRNKRNKKQDKKEKEKEKKQDKKQKEKEKKSKKGSKDEASNYKQLSPLPSGQERAFCLAQGSCYYKTLTCPAECTHRKPKKNKQQKGCFLDCSSKCEATCKYRKANCDGYGSLCYDPRFVGGDGVMFYFHGAKGGNFAIVSDDSLQINAHFIGSRPQGRTRDYTWVQAISVMFDTHTLFVAANRVSQWDDNVDSLMVQWDGETVSIPTDDDAEWKSNSEEREVEVERTDETNSVRVKVSGLLEVDIKVRPIGEEENRVHNYQLPAGDAFAHLETQFRFKNLTDLVEGVLGKTYRPNYESPVKRGFPMPMMGGEDRYRTPSLFSPFCKVCRFQRSSGFAADEGLLAQY 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele32g0215 499 MobiDBLite consensus disorder prediction 145 199 - -
Lele32g0215 499 Coils Coil 149 184 - -
Lele32g0215 499 PANTHER ROOT CAP DOMAIN-CONTAINING PROTEIN 182 485 - -
Lele32g0215 499 MobiDBLite consensus disorder prediction 162 191 - -
Lele32g0215 499 Pfam Root cap 427 483 IPR009646 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele32g0215 Lele-ChrLele32 1289502 1295857 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele29g0227 29 1307725 1310597 Lele32g0215 32 1289502 1295857 hybridization
Lele30g1183 30 14681563 14682831 Lele32g0215 32 1289502 1295857 hybridization