Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele30g1183 ATGGCTAAGCTCAAACTCATCATCTTGGCTGCTTTCTTCATCTTGCTCATCACTATGGAAGTGGCCATTGCTGCCACTGAAGGCGAAGGCAATGGAAAAGGCATGGAGAAGAAGGACAAGGAGAAGGAGAAGAAAGAAAAGGAGAAGGAGAAGAAAGAAAAGGAAAAGGAGAAGAAACAAGAGAAGAAAGAAAAGGAAAAAGAGAAAAAGTCAAAGAAGGGATCAAAAGATGAAGCGTCAAATTATAAGCAGCTGTCGCCTCTGCCATCAGGACAAGAACGAGCTTTCTGCCTTGCACCAGGATCTTGTTATTATAAGACCCTTACTTGTCCAGCCGAGTGCGCAAATAGAAAGCCCAAGAAGAACAAGCAGCAAAAAGGTTGCTTCCTTGACTGCAGCAGCAAATGCGAAGCCACCTGCAAGTATAGAAAAGCCAACTGTGATGGCTATGGATCTCTCTGCTACGACCCACGATTTGTTGGTGGTGACGGTGTCATGTTCTACTTCCATGGAGCCAAAGGTGGCAACTTTGCCATCGTCTCTGATGACAATCTCCAAATCAACGCACATTTCATCGGATCTAGACCCCAAGGAAGGACTCGTGACTACACATGGGTGCAAGCCATTTCTGTCATGTTCGATACAAACACTCTCGTTGTGGCAGCGAACAGAGTATCTCAATGGGACGAAAACGTCGACTCTTTGATGGTACAATGGAATGGTAAAACAGTGAGCATTCCTACTGGTGATGATGCTGAATGGAAGAGTAACAGTGAAGAGAGAGAAGTGGAAGTGGAAAGAACAGATGAAACCAACAGCGTGAGAGTGAAAGTTTCAGGCTTGTTAGAGGTGGATATTAAGGTAAGACCCATTGGAGAAGAAGAAAACAGAGTGCACAATTATCAGTTGCCTGCAGGTGATGCTTTTGCTCATTTGGAGACACAATTCAGATTCAAGAACCTCACAGATTTAGTTGAAGGAGTTTTGGGTAAGACTTACAGGCCTAACTACGAAAGCCCAGTGAAGAGAGGTGTTCCTATGCCAATGATGGGTGGGGAGGACAAATACAGAACTCCTTCTCTGTTTTCACCTTTCTGCAAAGTTTGCAGGTTCCAGAGATCATCTGGGTTTGCTGCTGATGAAGGACTCCTCGCTCAATACTGA 1164 0.4485 MAKLKLIILAAFFILLITMEVAIAATEGEGNGKGMEKKDKEKEKKEKEKEKKEKEKEKKQEKKEKEKEKKSKKGSKDEASNYKQLSPLPSGQERAFCLAPGSCYYKTLTCPAECANRKPKKNKQQKGCFLDCSSKCEATCKYRKANCDGYGSLCYDPRFVGGDGVMFYFHGAKGGNFAIVSDDNLQINAHFIGSRPQGRTRDYTWVQAISVMFDTNTLVVAANRVSQWDENVDSLMVQWNGKTVSIPTGDDAEWKSNSEEREVEVERTDETNSVRVKVSGLLEVDIKVRPIGEEENRVHNYQLPAGDAFAHLETQFRFKNLTDLVEGVLGKTYRPNYESPVKRGVPMPMMGGEDKYRTPSLFSPFCKVCRFQRSSGFAADEGLLAQY 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele30g1183 387 MobiDBLite consensus disorder prediction 27 87 - -
Lele30g1183 387 PANTHER ROOT CAP DOMAIN-CONTAINING PROTEIN 8 373 - -
Lele30g1183 387 Coils Coil 33 78 - -
Lele30g1183 387 Pfam Root cap 315 371 IPR009646 -
Lele30g1183 387 MobiDBLite consensus disorder prediction 31 79 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele30g1183 Lele-ChrLele30 14681563 14682831 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele30g1183 30 14681563 14682831 Lele31g1324 31 19259542 19261464 hybridization
Lele30g1183 30 14681563 14682831 Lele32g0215 32 1289502 1295857 hybridization