Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele29g0227 ATGTTACTAGGCTTTGGTGTTAAACATTTGAGGCCACAACCTCAGGTGGGAAATGATCAAGAGACGAAGGAATGGGAATATGACTCGTCGCAAGGTCCGGCGGCATCTAAGGTGCGGTGCGGTGCGGATGAACGACCTGGTTTTAAGTCTGCTGATCTGTCGTATTTATTACAGAAACTCAAAGATATGGCTAAGCTCAAACTCATTATCTTGGCTGCTTTCTTCATCTTGCTCATCACTATGGAAGTGGCCATTGCTGCCGCTGAAGGTGAAGGCAATGGAAAAGGCATGGAGAAGAAGGACGAGGAAAAGGAGAAGAAAGAAAAGGAAAAGGTGAAGAAAGAAAAGGAGAAGGAGAAGAAAGAGAAGGAAAAGGAGAAGAAAAAAGAGAAGAAAGAAAAGGAAAAGGACAAGAAAGAAAAGGAAAAAGAGAAAAAGGCAAAGAGGGGATCAAAAGATGAAGCATCAAATTATAAGCAACTGTCGCCTCTGCCATCAGGACAAGAACGAGTTTTCTGCCTTGCACAAGGATCTTGTTATTATAAGACCCTTACTTGTCCAGCCGAGTGCGCACAAAGAAAGCCCAAGAAGAACAAGCAGCACAAGGGTTGCTTCGTTGACTGCAGCAGCAAATGCGAAGCCACCTGCAAGTATAGAAAACCCAACTGCGATGGCTATGGATCTCTCTGCTACGACCCACGATTTGTTGGTGGTGACGGTGTTATGTTCTACTTCCATGGAGCCAAAGGTGGCAACTTTGCCATCGTCTCTGACGACAATCTCCAAATAAACGCCCATTTCATCGGATCTAGACCCCATGGAAGGACTCGTGACTACACATGGGTCCAAGCCATTTCTGTCATGTTCGACACACACACCCTAGTTGTGGCAGCGAACAGAGTATCTCACTGGGACGATAATGTGGATTCTTTGATGGTACAATGGGATGGCGAAACAGTGAGCATTCCTACCGGTGATGATGCTGAATGGAAGAGTAACAGTGAAGAGAGAGAAGTGCAAGTGGAAAGAACAGATGAAACCAACAGTGTGAGAGTGAAAGTTTCAGCCTTGTTAGAGGTGGACATTAAGGTAAGACCCATTGAAGAAGAAGAAAACAGAGTTCACAATTATCAGTTGCCTGCAGGTGATGCTTTTGCTCATTTGGAGACACAATTCAGATTCAAGAACCTCACAGATTTAGTTGAAGGAGTTTTGGGTAAGACTTACAGGCCAGACTACGTGAGCCCAGTGAAGAGAGGTGTTCCTATGCCAATGATGGGTGGAGAGGACAAATACAGAACTCCTTCTCTGTTTTCACCTTTCTGCAGAGTTTGCAGGTTCCAGAGATCATCTGGATTTGCTGCTGATGAGGGAATCCTCGCTCAATACTGA 1392 0.4511 MLLGFGVKHLRPQPQVGNDQETKEWEYDSSQGPAASKVRCGADERPGFKSADLSYLLQKLKDMAKLKLIILAAFFILLITMEVAIAAAEGEGNGKGMEKKDEEKEKKEKEKVKKEKEKEKKEKEKEKKKEKKEKEKDKKEKEKEKKAKRGSKDEASNYKQLSPLPSGQERVFCLAQGSCYYKTLTCPAECAQRKPKKNKQHKGCFVDCSSKCEATCKYRKPNCDGYGSLCYDPRFVGGDGVMFYFHGAKGGNFAIVSDDNLQINAHFIGSRPHGRTRDYTWVQAISVMFDTHTLVVAANRVSHWDDNVDSLMVQWDGETVSIPTGDDAEWKSNSEEREVQVERTDETNSVRVKVSALLEVDIKVRPIEEEENRVHNYQLPAGDAFAHLETQFRFKNLTDLVEGVLGKTYRPDYVSPVKRGVPMPMMGGEDKYRTPSLFSPFCRVCRFQRSSGFAADEGILAQY 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele29g0227 463 MobiDBLite consensus disorder prediction 92 162 - -
Lele29g0227 463 MobiDBLite consensus disorder prediction 93 155 - -
Lele29g0227 463 Pfam Root cap 391 447 IPR009646 -
Lele29g0227 463 MobiDBLite consensus disorder prediction 12 41 - -
Lele29g0227 463 Coils Coil 97 151 - -
Lele29g0227 463 PANTHER ROOT CAP DOMAIN-CONTAINING PROTEIN 69 449 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele29g0227 Lele-ChrLele29 1307725 1310597 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele29g0227 29 1307725 1310597 Lele31g1324 31 19259542 19261464 hybridization
Lele29g0227 29 1307725 1310597 Lele32g0215 32 1289502 1295857 hybridization