Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele32g0154 ATGAGTGTCTCTCACAGGCCAGGTTTTGATTTGAATATTCTTTCCAAGTTGACCAAGTGGCCTCCACTCCTCCTCCCACCAAATATCGGCTTATGTTTGAAACATTACAGTTACCAAACGGTGCTAACAGAACAACCACCGTCCGATCAGAAGAGCCATAAAGCTGCTGTTCCTATATTTTATGTATTCAATAATTATACGTCCCAGGATAATCTGGGTCCTGTGATCTGCTCTGCACCGTCGATGATGGCCATTGTTGAAGTGATGCATGAGCCACTAGAACTGAGGACAAGAGCCCTTAAGCGTTCTACTGCTTTCTGCGTGGAAATAAATAAAGTAATGCATGAAATTCTACTACTGTACACAAGACTGGCTGTACTAAATCCCAAACAACCATATTTTGTTGGTAGCTGTTGTCTGCCACGTAATCAATCGCTTGAACCTCCTTCGCGGGAAAGGTATGGCCAGCCTCTACTCCTGGTCTGCGAAACGGTACTGTCTCTGTTCTTTAAGCTATTGGAACGCTCACTTGCAGCTGAAATCAGAGTTCTGTTTCTTAAGTTTTTTTTTGGTCGTCCATGCAGGAGTTACAAAAACGGTTTCGTTTGGCACGACTTATCGGGGAACGATTTCATCTACCCGACCCAGGGGCAAGACTATATTCTTAAAGGATCGGAGATTCTCGAGCACTCTTCTATTCAGAGGCCTTTTGAAACGGTGTCGTCTCGGTCTCTCAGGCCGCCTGAGGATATTCGCAAGTCGGACGATGATTCTGATTTTCCGGTGATCACGAGGAGGCGCAACCAGTCTTGGAGCTCCATAGACCTCAACGAGTACAGGGTGTACAAGTCTGAGTCTTCTGGTGACTCTTCCGAGAAACTCGCTGCCGACGCCTCGACTCAGACGGAGGATAAGCGATGGCGGAGGGCGGTCAGGGAAGAGAAAGAAATCGAATTGGAGGGGAAGAGAATCCCTGAGTCGCGGATGATTGGTCATAATCAAAGTACGGAGCTGAGCAGGGAGGAAATTTCACCTCCACCGTCGGATTCAAGCCCCGAAACACTGGAGACGTTGATGAGTGCAGATGGACGGCTAGCATTGTCGTCCGCGAGAATCGATAAAGATGGTGAAAATCTGTCGGCTTATAACTACCCAAGCGGAAGGATGAAAGCGTCGTCGGTTCTGATCCAATTGTTATCGTGCGGTTCAATCTCCTTCAAGGACTGTGAGCCCACTTCCATAAAAGATCAAGGGCTATGCTTGACGGGGAACCAAAAGTCAAGTTTGGCCTGCGGATCTGGGAATCAAACAACGAAGGAGACGGGGACTTCAATGGAAATACCAGATATGAGCGGCGTCAGATTAGAAGATATGGAGTATTTTAGCGGAAGTTTGATAGAGACCAAGAAATCGGAATTTCCTGCGTTGAAAAGGTCATCTTCTTACAATGCCGATAGGGATTTTGGTGGCATATATGTTTGTTTCGGGGATATTGTTGCAAGGCAACGTGCCTGTGTCTACGGATGTTGTCGAATGAGCATGATCATGTGGTCGGTTCCTATTCATCTAGGTAAAGAGGAAGACAAAATGGCCTCATAA 1599 0.4684 MSVSHRPGFDLNILSKLTKWPPLLLPPNIGLCLKHYSYQTVLTEQPPSDQKSHKAAVPIFYVFNNYTSQDNLGPVICSAPSMMAIVEVMHEPLELRTRALKRSTAFCVEINKVMHEILLLYTRLAVLNPKQPYFVGSCCLPRNQSLEPPSRERYGQPLLLVCETVLSLFFKLLERSLAAEIRVLFLKFFFGRPCRSYKNGFVWHDLSGNDFIYPTQGQDYILKGSEILEHSSIQRPFETVSSRSLRPPEDIRKSDDDSDFPVITRRRNQSWSSIDLNEYRVYKSESSGDSSEKLAADASTQTEDKRWRRAVREEKEIELEGKRIPESRMIGHNQSTELSREEISPPPSDSSPETLETLMSADGRLALSSARIDKDGENLSAYNYPSGRMKASSVLIQLLSCGSISFKDCEPTSIKDQGLCLTGNQKSSLACGSGNQTTKETGTSMEIPDMSGVRLEDMEYFSGSLIETKKSEFPALKRSSSYNADRDFGGIYVCFGDIVARQRACVYGCCRMSMIMWSVPIHLGKEEDKMAS 532
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele32g0154 532 PANTHER UPSTREAM OF FLC PROTEIN (DUF966) 195 512 IPR010369 -
Lele32g0154 532 MobiDBLite consensus disorder prediction 287 309 - -
Lele32g0154 532 MobiDBLite consensus disorder prediction 238 261 - -
Lele32g0154 532 MobiDBLite consensus disorder prediction 325 355 - -
Lele32g0154 532 MobiDBLite consensus disorder prediction 329 355 - -
Lele32g0154 532 MobiDBLite consensus disorder prediction 245 261 - -
Lele32g0154 532 Pfam Protein SOSEKI, plant 195 486 IPR010369 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele32g0154 Lele-ChrLele32 884648 890126 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele29g0166 29 906767 909388 Lele32g0154 32 884648 890126 hybridization
Lele30g1242 30 15093165 15097216 Lele32g0154 32 884648 890126 hybridization