Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele29g0166 ATGGAGGTCACTTCCAAATCAAGAATATCAGAGCTCCAAATCCCCAAGAAATGGAAGGACAGAGACACCAGCCCTGAAAGAACTAAAGTCTGGACTGAACCTAAGCCCAAATCCGAGAGGAAGGTCTCTGTCGTTTATTACCTTTCCAGGAATGGCCAGCTTGAGCACCCACATTTCATGGAGGTCCCTCTCCCCTCTCCCCAAGGACTCTACCTCAGAGACGTAATCAATCGCTTGAACCTCCTTCGTGGGAAAGGTATGGCCAGCCTGTACTCCTGGTCTGCGAAACGGAGTTACAAAAACGGTTTCGTTTGGCACGACTTATCAGAGAACGATTTCATCTACCCGACGCAGGGGCAAGAGTACATTCTTAAAGGATCGGAGATTCTCGAGCACCCTTCTATTCAAAGGCCTTTTGAAACAGCCTCGTCTCGGTCTCTCAGGCCGCCTGAGGATATTCACAAGTCGGACGATGATTCTGATTTTCCAGTGATCACGAGGAGGCGCAACCAGTCTTGGAGCTCCATAGACCTCAACGAGTACAGGGTGTACAAATCTGAGTCTTCCGGTGACTCTTCCGGGAAACTCGCCGCCGACGCCTCGACTCAGACGGAAGATAAGCGAAGGCGGAGGAGGGCGGTCAGGGAAGAGAAAGAAATCCAAGTGGAGGGGGAGAGAATCCCGGAGTCGCGGATGATTGGTCATAATCAAAGTACGGAGCTGAGCAGGGGGGAAATTTCACCTCCACCGTCGGATTCAAGCCCCGAGACACTAGAGACGTTGATGAGGGCAGATGGACGACTAGCATTGTCGTCTGCGAGAATCGATAAAGATGGTGCCAATCTGTCGGCTTATAACTACCCAAGCGGAAGAATGAAAGCATCGTCGGTTCTGATACAATTGTTATCGTGCGGTTCAATCTCTTTCAAGGACTGCGAACCCACTTCCATAAAAGATCAAGGGTTATGCTTGACCGGGAATAACAAGTCAAGTTTGGCCCGCGGAGCAGAGAATCAAACAACGAAGGAGACGGGCACTTCAGTTGAAATACCGGATTTGAGCGGGGTCAGATTAGAAGACATGGAGTATTTCAGCGGGAGTTTGATCGAGACCAAGAAATCGGATTTTCCTGCGTTGAAGAGGTCATCTTCTTGCAATGCCGATAGTGGATCACAGTTACAGATAAGGGAGGGCGGAGACGCCGTGAGGGCCAAGTGCCTGCCGAGGAAGTCGAAGACGATGACGGTGAAGAAAGAAAACAATGGCGGCAAAAGAATTGAAGCGCAACTGTCAATGTGA 1299 0.5027 MEVTSKSRISELQIPKKWKDRDTSPERTKVWTEPKPKSERKVSVVYYLSRNGQLEHPHFMEVPLPSPQGLYLRDVINRLNLLRGKGMASLYSWSAKRSYKNGFVWHDLSENDFIYPTQGQEYILKGSEILEHPSIQRPFETASSRSLRPPEDIHKSDDDSDFPVITRRRNQSWSSIDLNEYRVYKSESSGDSSGKLAADASTQTEDKRRRRRAVREEKEIQVEGERIPESRMIGHNQSTELSRGEISPPPSDSSPETLETLMRADGRLALSSARIDKDGANLSAYNYPSGRMKASSVLIQLLSCGSISFKDCEPTSIKDQGLCLTGNNKSSLARGAENQTTKETGTSVEIPDLSGVRLEDMEYFSGSLIETKKSDFPALKRSSSCNADSGSQLQIREGGDAVRAKCLPRKSKTMTVKKENNGGKRIEAQLSM 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele29g0166 432 MobiDBLite consensus disorder prediction 186 257 - -
Lele29g0166 432 MobiDBLite consensus disorder prediction 1 35 - -
Lele29g0166 432 PIRSF UCP031043 10 431 IPR021182 -
Lele29g0166 432 MobiDBLite consensus disorder prediction 12 35 - -
Lele29g0166 432 PANTHER UPSTREAM OF FLC PROTEIN (DUF966) 19 418 IPR010369 -
Lele29g0166 432 MobiDBLite consensus disorder prediction 139 166 - -
Lele29g0166 432 MobiDBLite consensus disorder prediction 201 230 - -
Lele29g0166 432 MobiDBLite consensus disorder prediction 147 165 - -
Lele29g0166 432 Pfam Protein SOSEKI, plant 42 389 IPR010369 -
Lele29g0166 432 MobiDBLite consensus disorder prediction 232 257 - -
Lele29g0166 432 MobiDBLite consensus disorder prediction 186 200 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele29g0166 Lele-ChrLele29 906767 909388 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele29g0166 29 906767 909388 Lele31g1386 31 19654644 19657269 hybridization
Lele29g0166 29 906767 909388 Lele32g0154 32 884648 890126 hybridization