Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele30g1242 ATGCAACAAGGATGGTCAAAGTTAGGTGGAGATGGTAGAAGTCTGGGCAGTCAACCCCCAGCTTTGCTTCCTTTGAATTTTCTCACAAGGTGGTTGAAACGTACCCCTTTGAACACAAGAAGTGCCTTTTATTATTATCTGTTCCTTGCCAAGAGGATTCGCCCAGCTAATAGTGTCGATCTGTTAGATTCACGTGATGTTGCTATGAAAGTGAACATGAATTTTTTAATTAGATTTTGTCCCTTCTCTTTCGTCTCTCTTCTTCTATCTCTGCTCCATCAATTTGTTCACTCCCTGTTGTTATTCCCGGTCACCGTCATGCAGAGAGGAATTATGGAGGTCACTTCCAAATCAAGAATATCAGAGCTCCAAATTCCCAAGAAATGGAAGAACAGAGACACCAGCCCTGAAAGAACCAAAGTCTGGACTGAACCTAAGCCCAAATCCGAGAGGAAGGTCTCTGTCATTTATTACCTTTCCAGAAATGGCCAGCTTGAGCACCCGCATTTCATGGAGGTCCCTCTCTCCTCTCCTCAAGGACTCTACCTCAGAGACGTAATCAATCGCCTGAACCTCCTTCGCGGGAAAGGTATGGCCAGCCTCTACTCCTGGTCTGCGAAACGGAGTTACAAAAACGGTTTCGTTTGGCACGACTTATCGGGGAACGATTTCATCTACCCGACCCAGGGGCAAGAGTATATTCTTAAAGGATCGGAGATTCTCGAGCACTCTTCTATTCAGAGGCCTTTTGAAACGGCGTCGTCTCGGTCTCTCAGGCCGCCTGAGGATATTCGCAAGTCGGACGATGATTCTGATTTTCCGGTGATCATGAGGAGGCGCAACCAGTCTTGGAGCTCCATAGACCTCAACGAGTACAGGGTGTACAAGTCTGAGTCTTCTGGTGACTCTTCCGGGAAACTCGCCGCTGACGCCTCGACTCAGACGGAGGATAAGCGATGGCGAAGGAGGGCGGTCAGGGAAGAGAAAGAAATCGAAGTGGAGGGGGAGGGAATCCCTGAGCCGCGGATGATTGGTCATAATCAAAGTACGGAGCTGAGCAGGGAGGAAATTTCACCTCCACCGTCGGATTCAAGCCCCGAAACACTGGAGACGTTGATGAATGCAGATGGACGGCTAGCATTGTCGTCCGCGAGAATCGATAAAGATGGTGAAAATCTGTCGGCTTATAACTACCCAAGCGGAAGGATGAAAGCATCGTCGGTTCTGATCCAATTGTTATCGTGCGGTTCAATCTCCTTCAAGGACTGCGAGCCCACTTCCATAAAAGATCAAGGGCTATGCTTGACGGGGAACCAAAAGTCAAGTTTGGCCCGCGGAGCTGGGAATCAAACAACGAAGGAGACGGGGACTTCCATTGGAATAGCAGATTTGAGCGGGGTCAGATTAGAAGATATGGAGTATTTTAGCGGAAGTTTGATCGAGACCAAGAAATCGGAATTTCCTGCGTTGAAAAGGTCATCTTCTTACAATGCCGATAGTGGATCACAGTTACAGATAAGGGAGGGCGGAGACGCCGTGAGGGCCAAGTGCATGCCGAGGAAGTCGAAGACAATGACGGCGGCAAAGAAAGAGAACAATGGCGGAAAAAGAATTGAAGCGCAACAGTGA 1629 0.4862 MQQGWSKLGGDGRSLGSQPPALLPLNFLTRWLKRTPLNTRSAFYYYLFLAKRIRPANSVDLLDSRDVAMKVNMNFLIRFCPFSFVSLLLSLLHQFVHSLLLFPVTVMQRGIMEVTSKSRISELQIPKKWKNRDTSPERTKVWTEPKPKSERKVSVIYYLSRNGQLEHPHFMEVPLSSPQGLYLRDVINRLNLLRGKGMASLYSWSAKRSYKNGFVWHDLSGNDFIYPTQGQEYILKGSEILEHSSIQRPFETASSRSLRPPEDIRKSDDDSDFPVIMRRRNQSWSSIDLNEYRVYKSESSGDSSGKLAADASTQTEDKRWRRRAVREEKEIEVEGEGIPEPRMIGHNQSTELSREEISPPPSDSSPETLETLMNADGRLALSSARIDKDGENLSAYNYPSGRMKASSVLIQLLSCGSISFKDCEPTSIKDQGLCLTGNQKSSLARGAGNQTTKETGTSIGIADLSGVRLEDMEYFSGSLIETKKSEFPALKRSSSYNADSGSQLQIREGGDAVRAKCMPRKSKTMTAAKKENNGGKRIEAQQ 542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele30g1242 542 Pfam Protein SOSEKI, plant 153 500 IPR010369 -
Lele30g1242 542 PANTHER UPSTREAM OF FLC PROTEIN (DUF966) 131 532 IPR010369 -
Lele30g1242 542 MobiDBLite consensus disorder prediction 339 369 - -
Lele30g1242 542 MobiDBLite consensus disorder prediction 509 542 - -
Lele30g1242 542 MobiDBLite consensus disorder prediction 297 311 - -
Lele30g1242 542 MobiDBLite consensus disorder prediction 513 542 - -
Lele30g1242 542 MobiDBLite consensus disorder prediction 246 271 - -
Lele30g1242 542 MobiDBLite consensus disorder prediction 346 369 - -
Lele30g1242 542 MobiDBLite consensus disorder prediction 297 323 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele30g1242 Lele-ChrLele30 15093165 15097216 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele30g1242 30 15093165 15097216 Lele31g1386 31 19654644 19657269 hybridization
Lele30g1242 30 15093165 15097216 Lele32g0154 32 884648 890126 hybridization