Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele32g0089 ATGGTGCAGTATAACTTCAAGAAAATAACTGTGGTACCTAATGGGAAGGACTTCATTGACATAATCCTTTCTCGCACTCAGCGTCAAACACCAACTGTTGTGCATAAAGGATATAAGATTTCCCGCCTCCGTCAATTTTACATGCGCAAAGTAAAGTATACGCAACAAAATTTTCATGAAAAACTCTCCACTATCATTGATGAGTTCCCTCGGCTTGATGATATTCACCCATTCTATGGTGATCTCCTCCATGTACTCTACAACAAGGACCATTACAAGCTTGCACTTGGACAGATCAATACTGCTAGAAACCTTATTGGGAAGATTTGCAAGGACTATGTCAAGTTATTGAAGTATGGTGATTCACTATATAGATGCAAATGTCTGAAGGTTGCTGCTCTTGGCCGTATGTGTACTGTGATTAAGAGGATTGGCCCAAGTTTGGCTTATCTAGAGCAGGTGAGACAGCACATGGCAAGGCTCCCATCAATAGATCCAAACACGAGGACTATCTTGATTTGTGGTTACCCTAATGTTGGCAAGAGTTCATTCATTAACAAAATTACAAGAGCTGATGTGGATGTGCAGCCCTATGCTTTCACTACAAAGTCACTTTTTGTTGGTCATACAGACTACAAATACTTAAGGTACCAAGTAATTGATACACCAGGGATTCTGGACCGACCTTTTGAAGATCGAAACATTATTGAGATGTGCAGCATTACTGCCCTTGCTCATTTGCGAGCTGCTATATTGTTTTTCTTAGACATATCTGGATCTTGTGGTTATAGCATTGCACAGCAGGCAGCTCTATTTCACAGCATTAAGTCTCTGTTTATGAACAAGCCATTAATTGTAGTCTGCAATAAAACTGATTTGCAACCGCTGGAAGGGGTGTCTGAGGAAGACAAGAAGTTGATCACAGAGATGAAATCTGAGGCCTTGAAGACTCTATTTGGTCAACGACGTGAGCCTACAAATGATGAAAGTGCGTTGTTGACCATGAGCACTTTGACAGAAGATGGGGTAATTGCTGTAAAAAATGCAGCATGTGAAAGATTGTTAAATCAAAGGGTGGAGATAAAGATGAAGTCCAAAAAGATAAATGACTGCTTGAATAGATTTCATGTTGCTGTGCCAAAACCACGTGACCAGAAGGAAAGGCCACCTTGTATTCCTCTAGCAGTCATAGAAGCTAAGGCCAAACAAGCAGCAGAAAAGGAAAAGAGAAAAACTGAAAAGGATCTGGAAGATGAGAATGGTGGTGCAGGTGTATACTCAGCAAACCTGCGGAAGAACTATATTTTGGCTAATGATGAATGGAAAGAAGATGCACTGCCAGAAATTTTGGATGGACACAATGTGTATGATTTCATTGATCCTGATATTCTGCATAGGCTTGAAGAATTGGAAAGGGAAAACGGGCTAAGACAGGCTGAGGAGTTAGATGATGATTTTGAGATAGACGGAAATGAGTTGAGTCCAGAGGAACAGGAAGCTTTAGCGGCAATAAGAAAAAAGAAAAGCTTGCTCATCCAAGAGCATAGGAAGAAAAAGAGTACTGCAGAGAGCAGGCCAATTGTTCCAAGAAAACATGACAAGGATAGGAAGTTTACCACAGAAAGAATGGGAAGGCAGCTGTCATCTTTGGGGCTTGATCCCTCTTTGGCAATTGACAGAGCACACAGCAGATCTGTTTCTAGAAGAGGTAGAAAAAGGGAAAGGTCTCCTGAAGGCATAGGTGCTGATGTGATGGATATAGATGTTGATTCATCCAGCAAGAAGAAGCGTACTAGATCTAGATCAAGGTCCAGGTCAGTTTCACGCCCACCAACTGAATTTGTGCCTGGCGAGGGCTTGAAGGATTCTTCTCAAAAGATTAAGGCGGTAAAACTTGCAAAGAAATCTGTCAAGAAGCGGAACAAGGATGCTCGTCGGGGAGAAGCTGATAGGGTTATTCCTACTTTGAAGCCCAAGCACTTGTTTTCTGGGAAGCGTTCAATTGGAAAAACCCAAAGACGGTGA 2025 0.4178 MVQYNFKKITVVPNGKDFIDIILSRTQRQTPTVVHKGYKISRLRQFYMRKVKYTQQNFHEKLSTIIDEFPRLDDIHPFYGDLLHVLYNKDHYKLALGQINTARNLIGKICKDYVKLLKYGDSLYRCKCLKVAALGRMCTVIKRIGPSLAYLEQVRQHMARLPSIDPNTRTILICGYPNVGKSSFINKITRADVDVQPYAFTTKSLFVGHTDYKYLRYQVIDTPGILDRPFEDRNIIEMCSITALAHLRAAILFFLDISGSCGYSIAQQAALFHSIKSLFMNKPLIVVCNKTDLQPLEGVSEEDKKLITEMKSEALKTLFGQRREPTNDESALLTMSTLTEDGVIAVKNAACERLLNQRVEIKMKSKKINDCLNRFHVAVPKPRDQKERPPCIPLAVIEAKAKQAAEKEKRKTEKDLEDENGGAGVYSANLRKNYILANDEWKEDALPEILDGHNVYDFIDPDILHRLEELERENGLRQAEELDDDFEIDGNELSPEEQEALAAIRKKKSLLIQEHRKKKSTAESRPIVPRKHDKDRKFTTERMGRQLSSLGLDPSLAIDRAHSRSVSRRGRKRERSPEGIGADVMDIDVDSSSKKKRTRSRSRSRSVSRPPTEFVPGEGLKDSSQKIKAVKLAKKSVKKRNKDARRGEADRVIPTLKPKHLFSGKRSIGKTQRR 674
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele32g0089 674 PRINTS GTP1/OBG GTP-binding protein family signature 219 234 IPR006073 GO:0005525
Lele32g0089 674 PRINTS GTP1/OBG GTP-binding protein family signature 192 210 IPR006073 GO:0005525
Lele32g0089 674 PRINTS GTP1/OBG GTP-binding protein family signature 171 191 IPR006073 GO:0005525
Lele32g0089 674 Gene3D - 162 373 IPR027417 -
Lele32g0089 674 Pfam NOGCT (NUC087) domain 410 463 IPR012973 -
Lele32g0089 674 MobiDBLite consensus disorder prediction 512 674 - -
Lele32g0089 674 ProSiteProfiles OBG-type guanine nucleotide-binding (G) domain profile. 169 355 IPR031167 GO:0005525
Lele32g0089 674 CDD NOG 169 355 - -
Lele32g0089 674 MobiDBLite consensus disorder prediction 515 542 - -
Lele32g0089 674 Pfam NOG1 N-terminal helical domain 6 165 IPR041623 -
Lele32g0089 674 PANTHER NUCLEOLAR GTP-BINDING PROTEIN 1 3 509 - -
Lele32g0089 674 Gene3D - 3 161 - -
Lele32g0089 674 FunFam Nucleolar GTP-binding protein 1 3 161 - -
Lele32g0089 674 Coils Coil 402 422 - -
Lele32g0089 674 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 48 312 IPR027417 -
Lele32g0089 674 FunFam Nucleolar GTP-binding protein 1 162 374 - -
Lele32g0089 674 PIRSF NOG1 1 674 IPR024926 -
Lele32g0089 674 Pfam Nucleolar GTP-binding protein 1 (NOG1) 236 292 IPR010674 GO:0005525
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele32g0089 Lele-ChrLele32 521337 523361 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele29g0091 29 532358 536626 Lele32g0089 32 521337 523361 hybridization
Lele30g1305 30 15458753 15461628 Lele32g0089 32 521337 523361 hybridization