Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele29g0091 ATGAGCAGCAGACCCAAAGGATCTGAAACGATTTCTGCACTTGCAAGGAGTGCTATTCGTGGCAATTCAGCCTACCGAGACCACAACTCGGTCATTCATTCAGGCATATCGACAAAGATGGTGCAATATAACTTCAAGAAAATAACTGTGGTACCTAATGGGAAGGATTTCATTGACATAATCCTTTCTCGCACTCAGCGTCAAACACCGACTGTTGTGCATAAAGGATATAAGATTTCCCGCCTCCGTCAATTTTACATGCGCAAAGTAAAGTATACGCAACAAAATTTTCATGAAAAGCTCTCCACTATCATTGATGAGTTCCCTCGGCTTGATGATATTCACCCATTCTATGGTGATCTCCTCCATGTACTCTACAACAAGGACCATTACAAGCTTGCACTTGGACAAATCAATACTGCTAGAAACCTTATTGGGAAGATCTGTAAGGACTATGTCAAGTTATTGAAGTATGGCGATTCACTATATAGATGCAAATGTCTGAAGGTTGCCGCTCTTGGCCGTATGTGCACCGTGATTAAGAGGATTGGCCCAAGTTTGGCTTATCTAGAGCAGGTGAGACAGCACATGGCAAGGCTCCCATCAATAGATCCAAACACGAGGACTATTTTGATTTGTGGTTACCCTAATGTTGGCAAGAGCTCGTTCATCAACAAAATTACAAGAGCTGATGTGGATGTGCAGCCCTATGCTTTCACTACTAAGTCACTTTTTGTTGGTCATACAGACTACAAATACCTAAGGTACCAAGTAATTGATACACCAGGGATTCTGGATCGACCGTTTGAAGATCGGAACATTATTGAGATGTGCAGCATTACTGCCCTTGCTCATTTGCGAGCTGCTATATTGTTTTTCTTAGACATATCTGGATCGTGTGGTTATAGCATTGCACAGCAGGCCGCTCTATTTCACAGCATTAAGTCTCTGTTTATGAACAAGCCATTAATAGTAGTCTGCAATAAAACTGATTTGCAACCGATGGAAGGGGTGTCTGAGGAAGACAAGAAGTTGATCATGGAGATGAAAGCTGAGGCCTTGAAGACTCTGGTCGGTCAAGGAGGTGAGCCTACAAACGATGAAAGTGTGTTATTGACCATGAGCACTTTGACAGAAGATGGGGTAATTGCTGTAAAAAATGCAGCATGTGAAAGATTGTTGGATCAAAGGGTGGAGATAAAGATGAAGTCCAAAAGGATAAATGAGTGCTTGAATAGATTTCATGTTGCAGTGCCAAAACCACGTGACCAGAAGGAAAGGCCGCCTTGTATTCCTCCAGCAGTCTTAGAAGCTAAGGCCAAGGAAGCAGCAGAAAAGGAAAAGAGAAAAACTGAAAAGGATCTGGAAGATGAGAATGGTGGTGCAGGTGTATACTCAGCAAACCTGCGGAAGAACTATATTTTGGCTAATGATGAATGGAAAGAAGATGTACTGCCAGAAATTTTGGATGGTCACAACGTGTATGATTTCATTGATCCTGATATCCTGCATAGGCTTGAAGAATTGGAAAGGGAAGACGGGCTAAGACAGGCTGAGGAGTTAGATGATGATTTTGAGATAGACGGAAATGAGTTGACTCCAGAGGAACAGGAAGCTTTAGCTGCAATAAGAAAAAAGAAAAGCTTGCTCATCCAAGAGCATAGGAAGAAAAAGAGTACTGCTGAGAGCAGGCCAATTGTTCCAAGAAAACATGACAAGGACAGGAAGTTTACCAGAGAAAGAATGGGAAGGCAGCTGTCATCTTTGGGGCTTGATCCTTCTTTGGCAATTGACAGAGCACGCAGCAGGTCTGTTTCTAGGAGAGGTAGGAAAAGGGAAAGATCTCCTGAAGGCAGAGGTGCTGATGTGATGGATATAGATGTTGACTCATCCAGCAAGAAGCAACGTACTAGATCTAGATCAAGGTCCAGGTCAGTTTCACGCCCACCAACTGAATTTGTGCCTGGTGAGGGCTTGAAGGATTCTGCTCAAAAGATTAAGGCAGTAAAACTTGCAAAGAAATCTGTCAAGAAGCGGAACAAGGATGCTCGTCGTGGAGAAGCTGATAGAGTTATTCCTACTTTGAAGCCCAAGCACTTGTTTTCTGGGAAGCGTTCAATTGGAAAAACCCAAAGACGGTGA 2142 0.4304 MSSRPKGSETISALARSAIRGNSAYRDHNSVIHSGISTKMVQYNFKKITVVPNGKDFIDIILSRTQRQTPTVVHKGYKISRLRQFYMRKVKYTQQNFHEKLSTIIDEFPRLDDIHPFYGDLLHVLYNKDHYKLALGQINTARNLIGKICKDYVKLLKYGDSLYRCKCLKVAALGRMCTVIKRIGPSLAYLEQVRQHMARLPSIDPNTRTILICGYPNVGKSSFINKITRADVDVQPYAFTTKSLFVGHTDYKYLRYQVIDTPGILDRPFEDRNIIEMCSITALAHLRAAILFFLDISGSCGYSIAQQAALFHSIKSLFMNKPLIVVCNKTDLQPMEGVSEEDKKLIMEMKAEALKTLVGQGGEPTNDESVLLTMSTLTEDGVIAVKNAACERLLDQRVEIKMKSKRINECLNRFHVAVPKPRDQKERPPCIPPAVLEAKAKEAAEKEKRKTEKDLEDENGGAGVYSANLRKNYILANDEWKEDVLPEILDGHNVYDFIDPDILHRLEELEREDGLRQAEELDDDFEIDGNELTPEEQEALAAIRKKKSLLIQEHRKKKSTAESRPIVPRKHDKDRKFTRERMGRQLSSLGLDPSLAIDRARSRSVSRRGRKRERSPEGRGADVMDIDVDSSSKKQRTRSRSRSRSVSRPPTEFVPGEGLKDSAQKIKAVKLAKKSVKKRNKDARRGEADRVIPTLKPKHLFSGKRSIGKTQRR 713
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele29g0091 713 MobiDBLite consensus disorder prediction 554 582 - -
Lele29g0091 713 FunFam Nucleolar GTP-binding protein 1 201 413 - -
Lele29g0091 713 PRINTS GTP1/OBG GTP-binding protein family signature 210 230 IPR006073 GO:0005525
Lele29g0091 713 PRINTS GTP1/OBG GTP-binding protein family signature 258 273 IPR006073 GO:0005525
Lele29g0091 713 PRINTS GTP1/OBG GTP-binding protein family signature 231 249 IPR006073 GO:0005525
Lele29g0091 713 CDD NOG 208 394 - -
Lele29g0091 713 Pfam NOGCT (NUC087) domain 449 502 IPR012973 -
Lele29g0091 713 Gene3D - 201 412 IPR027417 -
Lele29g0091 713 MobiDBLite consensus disorder prediction 610 636 - -
Lele29g0091 713 Pfam NOG1 N-terminal helical domain 45 204 IPR041623 -
Lele29g0091 713 Coils Coil 438 461 - -
Lele29g0091 713 MobiDBLite consensus disorder prediction 551 713 - -
Lele29g0091 713 ProSiteProfiles OBG-type guanine nucleotide-binding (G) domain profile. 208 394 IPR031167 GO:0005525
Lele29g0091 713 Pfam Nucleolar GTP-binding protein 1 (NOG1) 275 331 IPR010674 GO:0005525
Lele29g0091 713 Gene3D - 41 200 - -
Lele29g0091 713 PANTHER NUCLEOLAR GTP-BINDING PROTEIN 1 42 548 - -
Lele29g0091 713 FunFam Nucleolar GTP-binding protein 1 42 200 - -
Lele29g0091 713 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 87 351 IPR027417 -
Lele29g0091 713 PIRSF NOG1 39 713 IPR024926 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele29g0091 Lele-ChrLele29 532358 536626 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele29g0091 29 532358 536626 Lele31g1457 31 20009050 20011342 hybridization
Lele29g0091 29 532358 536626 Lele32g0089 32 521337 523361 hybridization