Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele32g0073 ATGTCTTCTTCAACCGCCCCACCCACCACTTGCGCCTCCGCCTCCTCTGACCACCTCCCTACACCCACATTAGACCGCGAGTCTTCCGCTCTCCTCCACTCCATTTCCGAGCATGGAGGCTATGCTTACGTCAGCATGGCCGCCTCCGCCATCCTCGGCGACTTTCGAGCTGCCGAAGCTGCCCGTGAGATGGCCTGGGAGCAGCTACACTCGGGGCCTCGGCACTCCGTCCTCCCAGTTTGGCTCGACGCCTACTCCATGGCGTGCCTTCACGTCGCCAAGCACCATTACATCAACGGCGAGTTCAAGGAGGCTCTTAGGGCTTTGGATATGGGACTCATCATGGGGGGATCGCTTCTAAAGAAAGACTTGAGCTCTGCTGCTGACAAAGTATCGGAGAGGCTTCTGAACGTTAGGGCCTCCAAAGAAATCCACGAAGTCTTCGGGATGTCTGAGCATCGACTTGTCAGTCACGAACTCAACCAGGCCGAGGTGCACAAACTTCTGCCCTTCAACTCCCTTTCTCATAAAATTGTGGGGAAGAGGTCTGATCTGTCATTGGAAAGGTTCTTAGAAGATTATTACCGGTCTGGCTCCCCGGTTATCATCAGTGATTGTATGGCTCACTGGCCAGCCAAGACAAAATGGAATGACATAGATTATTTGGAAAAAGTTGCTGGTGATCGCACAATTCCGGTTGAGGTTCGGAAGAGCTATTCATGTGCAAAGGGGAAGCAAGAGTTAATTACATTTTCAGAGTTTCTTCGGCGTATAGAGTCTCATGGCTGCTCTTCTGTCGGTCCTACATATCTTGCTCAGCATCCACTATTTGATCAGATAAATGGACTTCGGAAAGATATTTGCATTCCTGACTACTGTTTTGCTGGTGGAGGCGAGCTAAGATCCCTCAATGCTTGGTTTGGTCCTGCTGGGATGGTAACACCATTACAACATGATCCACACCATAATATACTAGCTCAGGTTGTTGGGAAGAAATATGTAAGGCTCTACCCTCCATCTCTGTCTAAGGAACTTTACCCGTACACTGAAACAATGCTTATGAATTCCAGCCAGATTGATCTAGATAACATAAATGAAAAGATGTTGCCTGGGGTGCAAGACTTGGAATTCGTAGACTGTATAGTAGAGGAGGGTGAATTGCTATATATCCCGCAAAAGTGGTGGCACTATGACCGCTCGCTGACTACAAGTTTCTCCGTTAGTTTTTGGTGGAGTAAGGCCCAAACAGCTACATCCTGA 1260 0.4929 MSSSTAPPTTCASASSDHLPTPTLDRESSALLHSISEHGGYAYVSMAASAILGDFRAAEAAREMAWEQLHSGPRHSVLPVWLDAYSMACLHVAKHHYINGEFKEALRALDMGLIMGGSLLKKDLSSAADKVSERLLNVRASKEIHEVFGMSEHRLVSHELNQAEVHKLLPFNSLSHKIVGKRSDLSLERFLEDYYRSGSPVIISDCMAHWPAKTKWNDIDYLEKVAGDRTIPVEVRKSYSCAKGKQELITFSEFLRRIESHGCSSVGPTYLAQHPLFDQINGLRKDICIPDYCFAGGGELRSLNAWFGPAGMVTPLQHDPHHNILAQVVGKKYVRLYPPSLSKELYPYTETMLMNSSQIDLDNINEKMLPGVQDLEFVDCIVEEGELLYIPQKWWHYDRSLTTSFSVSFWWSKAQTATS 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele32g0073 419 ProSiteProfiles JmjC domain profile. 263 419 IPR003347 -
Lele32g0073 419 MobiDBLite consensus disorder prediction 1 23 - -
Lele32g0073 419 FunFam lysine-specific demethylase JMJ30 178 411 - -
Lele32g0073 419 SMART cupin_9 269 419 IPR003347 -
Lele32g0073 419 Gene3D Cupin 178 412 - -
Lele32g0073 419 SUPERFAMILY Clavaminate synthase-like 182 412 - -
Lele32g0073 419 PANTHER HYPOXIA-INDUCIBLE FACTOR 1 ALPHA INHIBITOR-RELATED 84 414 - -
Lele32g0073 419 Pfam Cupin-like domain 189 415 IPR041667 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele32g0073 Lele-ChrLele32 428679 432285 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele32g0073 173 397 Acyl Lipid Metabolism Gene Families AT3G45880 25.182 3.85e-12 65.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele29g0074 29 439418 445954 Lele32g0073 32 428679 432285 hybridization
Lele30g1321 30 15553503 15557088 Lele32g0073 32 428679 432285 hybridization