Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele29g0074 ATGGCAGCTCCGGCGGTACAAAAAGACGGGTTGCAAGAAGTGAGCTTTACCAGAACATGGTATCAAACCTTGTCAGCAATTTTCATTCAACCATTGCTACAAACCAGTTTACCTTATGTAGTGGTTGGTTTAGCAATTTTCGGTCCTTTGAATTGGGTTGTTCAACAAAAGAACGCCAAGAAACTCCCAGTGCATTGGTTGCTTCCTCTGTGTTGGGTTTTCTCAGGTATTGTAGCAGCATTGGCATGTGTTGTTGCCAAATACGTGCTTGTGGGAAGGAAGAAAGAGGGTGAAACAGTGGCCATATGGAGTCAAAGGGTAACAATTGATAGCACATGGCGGGCCATTAGAACTGTGGTTGGAGATTATTTCATGGACATGACAAGTGGTTCATTCTGGTTTGTGGTGTGGATGAAGTTGATGGGCGCAGAGGCAGATACAGATCGTGAGGCCTACGTGGACAGCGCGGAAGTATTATTGAACCATGAAATGGTGAAGATTGGGAGTGGAGGATGTGTGGGAAGAGAAGCTTTGTTCTTTGGGCACATATATGAAGGAGAAGGCGGCATGGTGAAGTTCGGAGAGATTAACATCGGAGAAGAAGCATTCGTAGGAAGTAGAGCTGTGGTGATGCCCGGCGTGCAAGTGGAAGATGGGGGTAGCCTCGGCACATTGTCTCTTGCCATGAAAGGAGAAATCATTAGCTCCATAAATACGGCCCTGGACAAAGCCTTCGCTTGTATGTTGAGCATTCTGATCCTAACTCTGGTCATTTCACCATCGTTTTCTGAATCCTCTAGTTCTTGTCTCCCTTGCGGGACAACCACCATGGTAGGGAACAGAGCCCCTTCCACAGCTTCAAGCACAACGAACAAAGACATGAAGATGGGAATGGATTCTTCGCGCACAACCCTAGATGGGCACGACAGCAAAGGAGAAACGGTAGATAGTGATTTTCGTTGGCCTGTTGTTTGTTTCTTATGTGATGATTTAGTTGAATACGTGGCCTTCTCGTGTGCTCGAGTGTTCCACGCCCGCTTCGCTTCCTCCTGCTCCTCATCCCGCATTCCATGCGTGATCGGTCACATGTCTTCTTCAACCGCCTCAGTCGCCAGTAGCGGCTACGGCTCCTCTGACCACCTCCCCACACCCACATTAGACCGCCAGTCTTCCGCTCTCCTCCACTCCATTTCCCAGCATGGAGGCTATGCTTACGTCAGCATGGCCACCCTCGCCATCCTCGGCGACTTCCGAGCTGCCGAAGCTGCCCGTGAGATGGCCTGGGAGCAGCTGCACTCTGGGCCTCGGCACTCCGTCCTCCCAGTTTGGCTCGACGCCTACTCCATGGCGTGTCTTCACGTTGCCAAGCACCATTACATCAAGGGCGAGTTCAAGGAGGCTCTTAGGGCTTTGGATATGGGACTTATCATGGGGGGATCGCTTCTAAAGAAAGACTTGAGCTCTGCTGCTGACAGAGTATCGGAGAGGCTCCGGAACATTAGGGCCTCCAAAGAAAGCCACGAAGTCTCCGGGATGTCTGAGCATCGACTTGTCAGTCACGAACTCGACCAGGCCGATGTGCACAAACTTCTGCCCTTCAACTCCCTTTCTCATAAAATCGTGGAGAAGAGGTCTGATCTGTCATTGGAAAGGTTCCTAGAAGATTATTACCGGTCTGGCTCCCCGGTTATCATCAGTGATTGTATGGCTCACTGGCCAGCCAAGACAAAATGGAAGGACATAGATTATTTGGAAAAAGTTGCTGGTGATCGCACAATTCCGGTTGTGGTTCGGAAGAGCCATTTATGTGCAAAGGGGAAGCAAGAGTTAATTACATTTTCAGAGTTTCTTCGGCGTATAGAGTCCCATGGCTGCTCTTCTGTCGGTCCTACGTATCTTGCTCAGCATCCACTATTTGATCAGATAAATGAGCTTCGGAAAGATATTTGCATTCCTGACTACTGTTTTGCTGGTGGAGGGGAGCTAAGATCCCTCAATGCTTGGTTTGGTCCTGCTGGGATGGTAACACCATTACAACATGATCCACACCATAATATACTAGCTCAGGTTGTTGGGAAGAAATATGTAAGGCTCTACCCTCCATCTCTGTCTAAGGAACTTTACCCTTACACTGAAACAATGCTTATGAATTCCAGCCAGATTGATCTAGACGACATAGATGAAAAGATGTTGCCTGGGGTGCAAGACTTGGAATTCGTAGATTGTATATTAGAGGAAAGTGAATTGCTATATATCCCGCAAAAGTGGTGGCACTATGTCCGCTCGCTAACTACAAGTTTCTCCGTTAGTTTTTGGTGGAGTAAGGCCCAAGGTTCAACTACATCCTGA 2349 0.4849 MAAPAVQKDGLQEVSFTRTWYQTLSAIFIQPLLQTSLPYVVVGLAIFGPLNWVVQQKNAKKLPVHWLLPLCWVFSGIVAALACVVAKYVLVGRKKEGETVAIWSQRVTIDSTWRAIRTVVGDYFMDMTSGSFWFVVWMKLMGAEADTDREAYVDSAEVLLNHEMVKIGSGGCVGREALFFGHIYEGEGGMVKFGEINIGEEAFVGSRAVVMPGVQVEDGGSLGTLSLAMKGEIISSINTALDKAFACMLSILILTLVISPSFSESSSSCLPCGTTTMVGNRAPSTASSTTNKDMKMGMDSSRTTLDGHDSKGETVDSDFRWPVVCFLCDDLVEYVAFSCARVFHARFASSCSSSRIPCVIGHMSSSTASVASSGYGSSDHLPTPTLDRQSSALLHSISQHGGYAYVSMATLAILGDFRAAEAAREMAWEQLHSGPRHSVLPVWLDAYSMACLHVAKHHYIKGEFKEALRALDMGLIMGGSLLKKDLSSAADRVSERLRNIRASKESHEVSGMSEHRLVSHELDQADVHKLLPFNSLSHKIVEKRSDLSLERFLEDYYRSGSPVIISDCMAHWPAKTKWKDIDYLEKVAGDRTIPVVVRKSHLCAKGKQELITFSEFLRRIESHGCSSVGPTYLAQHPLFDQINELRKDICIPDYCFAGGGELRSLNAWFGPAGMVTPLQHDPHHNILAQVVGKKYVRLYPPSLSKELYPYTETMLMNSSQIDLDDIDEKMLPGVQDLEFVDCILEESELLYIPQKWWHYVRSLTTSFSVSFWWSKAQGSTTS 782
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele29g0074 782 MobiDBLite consensus disorder prediction 281 313 - -
Lele29g0074 782 Pfam Cupin-like domain 551 776 IPR041667 -
Lele29g0074 782 SMART cupin_9 625 781 IPR003347 -
Lele29g0074 782 PANTHER HYPOXIA-INDUCIBLE FACTOR 1 ALPHA INHIBITOR-RELATED 446 776 - -
Lele29g0074 782 MobiDBLite consensus disorder prediction 281 298 - -
Lele29g0074 782 Gene3D Hexapeptide repeat proteins 120 230 - -
Lele29g0074 782 ProSiteProfiles JmjC domain profile. 625 782 IPR003347 -
Lele29g0074 782 SUPERFAMILY Trimeric LpxA-like enzymes 87 230 IPR011004 -
Lele29g0074 782 Gene3D Cupin 539 774 - -
Lele29g0074 782 SUPERFAMILY Clavaminate synthase-like 541 774 - -
Lele29g0074 782 FunFam lysine-specific demethylase JMJ30 540 773 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele29g0074 Lele-ChrLele29 439418 445954 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele29g0074 535 773 Acyl Lipid Metabolism Gene Families AT3G45880 25.773 1.32e-12 68.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele29g0074 29 439418 445954 Lele31g1474 31 20101746 20105773 hybridization
Lele29g0074 29 439418 445954 Lele32g0073 32 428679 432285 hybridization