Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele32g0070 ATGCTGAACCTTCAGACGAGCGCACAGACTTGTGGCCATAGCCATCTGGTGTTTCAGAAGTCATGGATAAACCTGCAGAGCGGCAAAAGTCCACTGCTACTTCTGGGACGCTCAATGGGAAACCAAAAGAAACACAAGGGGGTTAGGGTTAGGTGCAGCAGCAGTGGGGCGGACGTGAAAGCGGTGGCCGCCGTGGGAGGAAACACGGCGAATAAATCGACCAAGGTTAAAGTCACTCTAACAGTTCTGAGAACTGTAGGGGGCTATTTCTCAGAACTAGGCGTTCAGCGAGGGCTCGATGATATAAAGGAGCTGCTCGGTCAATCTCTTCAAGTGGAGCTCGTTAGCGCAGAGCTTGAACACAAGACGGGGCAGGAGAAGGAGACGATCAAAGGATTCGTGCACAGAACTGGGGAAGAGGATCAAGAGGTGAAGTACGAAGCAGAGTTAGAAGTGGGAAGCGAGTTCGGAGAAATAGGGGCGTTGATGGTGGAGAACGAACACCACAAGGAGGTTTTCGTGAAGGAGGTGCTCCTGCAGGGTTTCGAGGCCGGCCCCCGCCGCTTTTCCTGCAACTCATGGGTCCACTCCAAGTACGACGACCCCATCAAGCGGGTCTTCTTCCCCAACAAGTCATACTTGCCATCGGAGACGCCGGAGGGGATAAAGAGGATGAGGGAGGAGGAGCTGAAGCTGTTGCAGGGGAACGGCGTCGGAGAGAGGAAGAGCTACGAGAGAGTGTACGATTACGACGTGTACAACGACCTTGGAGATCCGGACAGCAAAGACGAACTCAAGAGGCCAGTTCTGGGTGGCCACCAGAATCCTTATCCGAGGCGTTGTAGGACCGGCCGTCCCCGCTGTCACAAAGATCCATTATCAGAGCAAAGAAGTAGCAGCGTGTATGTGCCGAGAGACGAAGCGTTCTCAGAAGTGAAGCAGCTGACTTTTTCTACGAAGACGGTGTACTCGGTGTTGCATGCCCTAGTCCCCGCGCTGCAGACCAGCATGCTTGACGGCACTCTTGGCTTTCCTCTGTTCTCGTCCATTGACTCTCTTTTCAGCGAAGGCATTGACTTGCCTGCTCTTAAAAACCAAAGCTTTCTCAGGACCCTTTTGCCTCGCCTCGTCAAGTTCATCAATGACGCCGAACAGGACATCCTACGTTTTGAGACGCCCCCGACTATGGACAGAGACAGGTTCTTTTGGTTTAGGGACGAGGAATTCGCAAGGCAAACTCTTGCAGGTCTTAACCCATGCAGCATTCAGTTGGTTACGGAGTGGCCATTGAAAAGTGCATTAGATCCCGAGATCTATGGCCCACAAGAATCAGCAATAACCACGGAAATCGTCGAGAAAGAAATAAGAGGTTTTGCCACGATTGAAGAGGCCATAAATCAGAAGAAGTTGTTCATCCTAGACTACCATGATCTGCTGCTACCATATGTGGAGAAGGTTAGACAGCTTGAAGGGACAACTCTATATGGCTCAAGGACCTTGTTCTTCCTAACCCCAGATAACACATTGAGGCCTTTGGCCATCGAGCTGACTCGGCCACCTATGGATGGCAAACCGCATTGGAGACAAGTTTTCACTCCCGCTTGGCACTCAACCGGTATTTGGCTCTGGAGGCTCGCCAAAGCCCACGTCCTTGCCCATGACTCCGGCTATCACCAACTCGTCAGTCACTGGCTACGCACCCATTGTTGTACGGAACCGTATATCATTGCGACAAACAGGCAACTCAGCGTTATGCACCCGATCTATAGGCTTCTGCATCCCCACTTCAGATACACGATGGAGATAAACGCTCTTGCTCGTGAGGCACTCATAAACGCGGGTGGAATAATAGAGAGCAGCTTCACGCCCGGCAAATACTCTATCGAAATTAGCTCCGTCGCGTACGACAAGCTGTGGCAGTTCAATTTAGAAGCCCTGCCCGCCGATCTCATCAGCAGGGGCTTGGCGGTGGAGGACCCCAGTGCTCCCCACGGGTTAAAGCTGACCATCGAGGACTACCCTTATGCCACCGACGGCCTCGTTCTTTGGGACGCCATCAAACAGTGGGTCACCGCCTATGTCAACCGTTACTACCCAGACCCGAGTTTGGTGGAATCGGACTCAGAGCTCCAGGCCTGGTGGGAGGAGATCCGAACGAAAGGCCATGCGGATAAAAAGGACGAGCCTTGGTGGCCGGTTCTTAAAACGCCCCAGGATCTCGTGGAGATCGTGACCACTATTGTTTGGATAACGTCGGGTCACCACGCGGCGGTTAATTTCGGGCAGTACGCGTATGCCGGGTATTTCCCGAACCGGCCCACCATTGCGAGAACTAATGTGCCCTCGGAGGACCCGACCGACACGGAATGGCAACTTTTCTGGAACAAACCAGAAGATTCACTATTGAAGTGCTTTCCCTCGCAAGTTCAGGCGACGACGGTGATGTCGGTTCTGGACATTCTGTCGAGTCACTCGCCGGACGAAGAGTATCTGGGGAGCACTGTGGAGCCGTCGTGGGAGGAGGATCCGGTAGTGAAAGCAGCTTTCGAGCAGTTCCAAGGGCGGCTGAAAGAGCTGGAAGGGTTGATCGATTTGAGGAACGCAGATCCAAATCTGAGGAACCGAAACGGTGCTGGGATTGTGCCTTATGAGCTATTGAAGCCGTTTTCTGAAGAACCGGGAGTTACCGGGAAGGGAGTTCCGTACAGTATATCCATTTGA 2721 0.5296 MLNLQTSAQTCGHSHLVFQKSWINLQSGKSPLLLLGRSMGNQKKHKGVRVRCSSSGADVKAVAAVGGNTANKSTKVKVTLTVLRTVGGYFSELGVQRGLDDIKELLGQSLQVELVSAELEHKTGQEKETIKGFVHRTGEEDQEVKYEAELEVGSEFGEIGALMVENEHHKEVFVKEVLLQGFEAGPRRFSCNSWVHSKYDDPIKRVFFPNKSYLPSETPEGIKRMREEELKLLQGNGVGERKSYERVYDYDVYNDLGDPDSKDELKRPVLGGHQNPYPRRCRTGRPRCHKDPLSEQRSSSVYVPRDEAFSEVKQLTFSTKTVYSVLHALVPALQTSMLDGTLGFPLFSSIDSLFSEGIDLPALKNQSFLRTLLPRLVKFINDAEQDILRFETPPTMDRDRFFWFRDEEFARQTLAGLNPCSIQLVTEWPLKSALDPEIYGPQESAITTEIVEKEIRGFATIEEAINQKKLFILDYHDLLLPYVEKVRQLEGTTLYGSRTLFFLTPDNTLRPLAIELTRPPMDGKPHWRQVFTPAWHSTGIWLWRLAKAHVLAHDSGYHQLVSHWLRTHCCTEPYIIATNRQLSVMHPIYRLLHPHFRYTMEINALAREALINAGGIIESSFTPGKYSIEISSVAYDKLWQFNLEALPADLISRGLAVEDPSAPHGLKLTIEDYPYATDGLVLWDAIKQWVTAYVNRYYPDPSLVESDSELQAWWEEIRTKGHADKKDEPWWPVLKTPQDLVEIVTTIVWITSGHHAAVNFGQYAYAGYFPNRPTIARTNVPSEDPTDTEWQLFWNKPEDSLLKCFPSQVQATTVMSVLDILSSHSPDEEYLGSTVEPSWEEDPVVKAAFEQFQGRLKELEGLIDLRNADPNLRNRNGAGIVPYELLKPFSEEPGVTGKGVPYSISI 906
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele32g0070 906 Gene3D - 420 554 - -
Lele32g0070 906 SUPERFAMILY Lipase/lipooxygenase domain (PLAT/LH2 domain) 75 213 IPR036392 GO:0005515
Lele32g0070 906 Pfam Lipoxygenase 222 888 IPR013819 GO:0016702|GO:0046872
Lele32g0070 906 Pfam PLAT/LH2 domain 127 208 IPR001024 GO:0005515
Lele32g0070 906 Gene3D - 555 904 - -
Lele32g0070 906 Gene3D - 232 330 - -
Lele32g0070 906 FunFam Lipoxygenase 537 905 - -
Lele32g0070 906 FunFam Lipoxygenase 420 554 - -
Lele32g0070 906 PANTHER LIPOXYGENASE 74 906 IPR000907 GO:0016702|GO:0034440|GO:0046872
Lele32g0070 906 ProSitePatterns Lipoxygenases iron-binding region signature 1. 558 572 IPR020833 GO:0016702|GO:0046872
Lele32g0070 906 PRINTS Plant lipoxygenase signature 818 832 IPR001246 GO:0016491
Lele32g0070 906 PRINTS Plant lipoxygenase signature 427 446 IPR001246 GO:0016491
Lele32g0070 906 PRINTS Plant lipoxygenase signature 244 260 IPR001246 GO:0016491
Lele32g0070 906 PRINTS Plant lipoxygenase signature 495 519 IPR001246 GO:0016491
Lele32g0070 906 PRINTS Plant lipoxygenase signature 388 404 IPR001246 GO:0016491
Lele32g0070 906 PRINTS Plant lipoxygenase signature 179 197 IPR001246 GO:0016491
Lele32g0070 906 PRINTS Plant lipoxygenase signature 276 295 IPR001246 GO:0016491
Lele32g0070 906 PRINTS Plant lipoxygenase signature 341 362 IPR001246 GO:0016491
Lele32g0070 906 PRINTS Plant lipoxygenase signature 205 226 IPR001246 GO:0016491
Lele32g0070 906 ProSiteProfiles Lipoxygenase iron-binding catalytic domain profile. 212 906 IPR013819 GO:0016702|GO:0046872
Lele32g0070 906 ProSiteProfiles PLAT domain profile. 89 209 IPR001024 GO:0005515
Lele32g0070 906 MobiDBLite consensus disorder prediction 260 297 - -
Lele32g0070 906 CDD PLAT_LH2 74 210 IPR042057 -
Lele32g0070 906 SMART LH2_4 74 210 IPR001024 GO:0005515
Lele32g0070 906 Gene3D - 332 419 IPR027433 -
Lele32g0070 906 PRINTS Lipoxygenase signature 578 598 IPR013819 GO:0016702|GO:0046872
Lele32g0070 906 PRINTS Lipoxygenase signature 540 557 IPR013819 GO:0016702|GO:0046872
Lele32g0070 906 PRINTS Lipoxygenase signature 558 575 IPR013819 GO:0016702|GO:0046872
Lele32g0070 906 Gene3D PLAT/LH2 domain 75 231 - -
Lele32g0070 906 SUPERFAMILY Lipoxigenase 214 906 IPR036226 -
Lele32g0070 906 ProSitePatterns Lipoxygenases iron-binding region signature 2. 585 595 IPR020834 GO:0016702|GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele32g0070 Lele-ChrLele32 402827 409621 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele32g0070 155 906 Acyl Lipid Metabolism Gene Families AT3G45140 61.376 0.0 977
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele29g0067 29 393765 397817 Lele32g0070 32 402827 409621 hybridization
Lele30g1326 30 15582889 15599916 Lele32g0070 32 402827 409621 hybridization