Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele30g1326 ATGATGCTCCTCCGTATTTATTGGAACTTCCTAAATCATCCCAACGAGATTAAATCGTTTCAAACTTTCAATTGCTTATCAAATTTGGGTCAATTGCTCTATTTACTACGCCCCATAACGCAGAGAAATATGATGATAAAGCCGCGACTACTGTACGAATCGCAATATGCAAACCGGATGCTCTTGTGTCTGGAGAGAACTTTTGCCCATGGCAGCGACACCCTATCACTGCCAACATGGTCTGAGAGGTCTGTCTGGAGGCAACTTCGGAGCCAAAAGGTGAAGGTGAAGCGTCTCGTCTTTGTTCCTCGCAATGCTCAAGTGAGCTCTCCTGTGGTTACAGAGACCACGGATGAGTCAGAGGAGAGCTTCCAGGTTAAGGCCGTCGTAAAGGTGAAACTGGCCAAGGCTGGTTTTTTCTCCAGCTTGAGCTTAGATAGACGAATCGATGACATCACCGACTTGCTCGGAAAATCTCTCCTCTTAGAACTTGTTAGCTCTGAACTTGATTCTGAGACGGGAGAGGAGAAAGAGACGAGGAAGGCATATGCACACAAAGGAAAACAACGAGAGGGATCGGTGGAATATGTGGCCGATTTTCAAGTGCCAAAGGACTTTGGGGAGATTGGCGCTGCTCTGGTGGAGAACGAGCATCATCAGGAGATGTTCCTCGAGACCGTGGTCCTCCGTGGCTTCCCTCAAGGTCCCATTCCTATTCACTGCGGATCTTGGGTTCACTCCAAGTTCAACAATCCTACTAAAAGAGTCTTCTTCACCAACAAGAGCTACATTCCGTCGGAGACGCCGAGTGGGCTGACAAGGTACAGGGAAGAGGAGCTGAGGAGCTTGAGGGGCAATCGAGAGGGAGAAAGGAAAGGCTTCGAGAGAATATACGATTTCGACGTTTACAATGACATTGGAAATCCTGATAAGAGGCTCGATCTCCAGAGACCTCCTCTCGGTGGTAGTGAACGTCCTTATCCACGACGCTGCCGGACTGGCCGTCCTCCTTGTGACGCAGATCCATTATCAGAGAAGAGAGTGAGGAACTTTTACGTTCCGAGGGATGAGTGCTTCTCGGAGGTGAAGCAGCTGACATTTTCAACAAAGGCATTACACTCGGCGCTGCTGATCTTGCTTCCGACTCTGGGGAGAGTAATAAAGGACAAGGATCTGCCATTCTCGTACTTCCATGATATTGATTCGCTGTTCAGCATAGGACTGGACTTGCCTCACCCTGAAAATCTGGAGCATGAAAAAGGATTCCTGTCCACCATTATGCCCAGGCTCGTCCGGCCCACCGAGGATGCCTCCTCTCCCTCTGCTCGTCCGCGCAGTGTTCTTCGCTTCGAGAGCCCCGAGACCATTAACAGGGATAGGTTTTTCTGGTTTAGGGACGAGGAATTTGCTAGACAGACTGTCGCTGGTCTCAACCCATGTAGCATCACATTGGTCACGGAATGGCCTTTGAGGAGTACACTCGATCCAAATATTTATGGTCCAGCAGAATCAGCAATTACCTCAGAGATAATAAACAAAGAAATTGGAGGATTGCTTACTGTGGAGCAGGCCGTAGAACAAAAGAAATTGTTCATTCTAGACTACCACGATCTATTGTTGCCGTACGTGAGCAAGGTACGGAAACTCAAAGGGGCGACACTATATGGATCACGAACCTTATTCTTCCTGAATCCAGCAGGGACCCTTAGGCCTCTAGCAATTGAGCTGACAAGACCACCCATGGATGGAAAAGATCAATGGAAGCAAGTTTTTACACCTGACTGGCACTCCACCAGCGTTTGGCTCTGGAGGCTTGCTAAAGCTCATGTTCTTGCTCACGACTCTGGTTATCATCAGCTTGTTAGTCACTGGTTAAGAACTCACTGTGTGTCAGAGCCTTATGTCATATCGACCAACCGGCAACTTAGCGAGATGCATCCTATATATAGACTACTTCATCCTCATTTTCGGTACACTTTGGAGATTAACGCTCTGGCTCGCGAGGCTCTTATTAATGCTGAGGGCACCATTGAAAGCTCCTTCTCTCCCGGAAAATACTCCATGGAGCTCAGTTCTGCCGCCTATGATGTTCAGTGGCGTTTTGACATGGAGTCTCTCCCTGCAGATCTCATTAGAAGGGGAATGGCGGTGGAAGATCCATTTCAACCCCACGGGCTGAGGCTGACGATTCAAGACTACCCATTTGCCAACGACGGTCTTCTTCTGTGGGACGCTATCAAGCAATGGGTCACTGATTATGTTAACCATTATTACCCAGATTCAGGCCTGCTGGCGACGGATCAAGAGCTCCAAGCATGGTGGACAGAGATTCGAACTGTTGGCCATGCAGACAAAAAGGACGAACCGTGGTGGCCTCGTCTTCAAACCCCAAAAGACCTCATTGAAATCCTTAGCACAATCATATGGGTAACTTCTGGTCACCATGCTGCAGTGAACTTTGGCCAATACGAATATGGCGGTTATTTCCCGAATCGACCAACTATTGCAAGAACTAAAATGCCCACGGAGGACCCTTCACCAGAAGAATGGGAAACATTCATCAAGAAGCCCGAAAGAGAACTGCTAAAGTGCTTCCCTTCACAGCTTCAAGCAACTAGAGTAATGGCTGTGTTGGATATTCTGTCAACTCATTCGCCAGATGAGGAATACATAGGGGAGAAGATGGAGCCATCATGGGGCGAAGATCCAGTGATTCAGGCAGCCTTTGAACGATTCAGTGAAAGACTGAAGAAATTTGAAAGAATTATTGACGAGAGGAACCGAAACAGCAAGTTGAAGAACAGAAATGGAGCAGGCATCGTCCCATACGAGCTGCTCAAGCCTTTCTCGAAGCCAGGGGTTACCGGCATGGGTGTTCCTTGTAGCATATCTATCTGA 2898 0.4827 MMLLRIYWNFLNHPNEIKSFQTFNCLSNLGQLLYLLRPITQRNMMIKPRLLYESQYANRMLLCLERTFAHGSDTLSLPTWSERSVWRQLRSQKVKVKRLVFVPRNAQVSSPVVTETTDESEESFQVKAVVKVKLAKAGFFSSLSLDRRIDDITDLLGKSLLLELVSSELDSETGEEKETRKAYAHKGKQREGSVEYVADFQVPKDFGEIGAALVENEHHQEMFLETVVLRGFPQGPIPIHCGSWVHSKFNNPTKRVFFTNKSYIPSETPSGLTRYREEELRSLRGNREGERKGFERIYDFDVYNDIGNPDKRLDLQRPPLGGSERPYPRRCRTGRPPCDADPLSEKRVRNFYVPRDECFSEVKQLTFSTKALHSALLILLPTLGRVIKDKDLPFSYFHDIDSLFSIGLDLPHPENLEHEKGFLSTIMPRLVRPTEDASSPSARPRSVLRFESPETINRDRFFWFRDEEFARQTVAGLNPCSITLVTEWPLRSTLDPNIYGPAESAITSEIINKEIGGLLTVEQAVEQKKLFILDYHDLLLPYVSKVRKLKGATLYGSRTLFFLNPAGTLRPLAIELTRPPMDGKDQWKQVFTPDWHSTSVWLWRLAKAHVLAHDSGYHQLVSHWLRTHCVSEPYVISTNRQLSEMHPIYRLLHPHFRYTLEINALAREALINAEGTIESSFSPGKYSMELSSAAYDVQWRFDMESLPADLIRRGMAVEDPFQPHGLRLTIQDYPFANDGLLLWDAIKQWVTDYVNHYYPDSGLLATDQELQAWWTEIRTVGHADKKDEPWWPRLQTPKDLIEILSTIIWVTSGHHAAVNFGQYEYGGYFPNRPTIARTKMPTEDPSPEEWETFIKKPERELLKCFPSQLQATRVMAVLDILSTHSPDEEYIGEKMEPSWGEDPVIQAAFERFSERLKKFERIIDERNRNSKLKNRNGAGIVPYELLKPFSKPGVTGMGVPCSISI 965
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele30g1326 965 MobiDBLite consensus disorder prediction 311 338 - -
Lele30g1326 965 FunFam Lipoxygenase 480 614 - -
Lele30g1326 965 ProSiteProfiles PLAT domain profile. 139 259 IPR001024 GO:0005515
Lele30g1326 965 SUPERFAMILY Lipoxigenase 264 965 IPR036226 -
Lele30g1326 965 Gene3D - 480 614 - -
Lele30g1326 965 SMART LH2_4 124 260 IPR001024 GO:0005515
Lele30g1326 965 Gene3D - 282 379 - -
Lele30g1326 965 Gene3D - 615 963 - -
Lele30g1326 965 ProSitePatterns Lipoxygenases iron-binding region signature 2. 645 655 IPR020834 GO:0016702|GO:0046872
Lele30g1326 965 Gene3D PLAT/LH2 domain 126 281 - -
Lele30g1326 965 Gene3D - 382 479 IPR027433 -
Lele30g1326 965 PANTHER LIPOXYGENASE 126 965 IPR000907 GO:0016702|GO:0034440|GO:0046872
Lele30g1326 965 SUPERFAMILY Lipase/lipooxygenase domain (PLAT/LH2 domain) 125 263 IPR036392 GO:0005515
Lele30g1326 965 Pfam PLAT/LH2 domain 193 258 IPR001024 GO:0005515
Lele30g1326 965 Pfam Lipoxygenase 271 948 IPR013819 GO:0016702|GO:0046872
Lele30g1326 965 ProSitePatterns Lipoxygenases iron-binding region signature 1. 618 632 IPR020833 GO:0016702|GO:0046872
Lele30g1326 965 ProSiteProfiles Lipoxygenase iron-binding catalytic domain profile. 262 965 IPR013819 GO:0016702|GO:0046872
Lele30g1326 965 FunFam Lipoxygenase 597 964 - -
Lele30g1326 965 PRINTS Lipoxygenase signature 600 617 IPR013819 GO:0016702|GO:0046872
Lele30g1326 965 PRINTS Lipoxygenase signature 618 635 IPR013819 GO:0016702|GO:0046872
Lele30g1326 965 PRINTS Lipoxygenase signature 638 658 IPR013819 GO:0016702|GO:0046872
Lele30g1326 965 PRINTS Plant lipoxygenase signature 294 310 IPR001246 GO:0016491
Lele30g1326 965 PRINTS Plant lipoxygenase signature 448 464 IPR001246 GO:0016491
Lele30g1326 965 PRINTS Plant lipoxygenase signature 487 506 IPR001246 GO:0016491
Lele30g1326 965 PRINTS Plant lipoxygenase signature 326 345 IPR001246 GO:0016491
Lele30g1326 965 PRINTS Plant lipoxygenase signature 878 892 IPR001246 GO:0016491
Lele30g1326 965 PRINTS Plant lipoxygenase signature 255 276 IPR001246 GO:0016491
Lele30g1326 965 PRINTS Plant lipoxygenase signature 555 579 IPR001246 GO:0016491
Lele30g1326 965 PRINTS Plant lipoxygenase signature 229 247 IPR001246 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele30g1326 Lele-ChrLele30 15582889 15599916 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele30g1326 202 965 Acyl Lipid Metabolism Gene Families AT3G45140 59.896 0.0 953
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele30g1326 30 15582889 15599916 Lele31g1480 31 20151042 20169683 hybridization
Lele30g1326 30 15582889 15599916 Lele32g0070 32 402827 409621 hybridization