Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele32g0028 ATGGCTGTGAACGAGGCTGACCAATCACATAAGCCTCACAGGTCTCGTCAGTCTGGTGCAAAGAAGGCCAAGTCGGATAAGAAGAAGAAGAAGCAAGAAGTTGGTGATGGCCATCACAAACAAAATCCTAAGGCGTTTGCTTTTGCGTCTTCCGTGAAAGCCAAAAGATTACAATCCCGTGCCGTCGAGAAAGAGCAGCGTCGTCTTCATGTTCCAATTATTGACCGGTCTTATGGTGAGCCAGCACCTTATGTCGTCGTGGTGCAGGGTCCTTCGAAGGTTGGGAAGTCGCTCTTAATAAAATCCTTGGTAAAACATTATACGAAGCAAAATTTGCCTGATGTTCGAGGTCCGATAACCATTGTATCAGGAAAGCAGAGGCGACTGCAGTTTGTGGAATGCCCAAATGATATCAATGGCATGATAGATGCCGCAAAATTTGCAGATCTAGCATTGCTTCTCATAGATGGGAGCTATGGTTTTGAAGTGGAAACCTTTGAATTCCTTAATATATTACAAGTTCATGGGTTCCCAAAGGTCATGGGTGTTCTGACTCATCTTGATAAATTCAAGGATGCTAAAAAGTTGAAGAAAACAAAGCAACGTCTTAAACACCGTTTCTGGACTGAAATATACGATGGAGCTAAATTGTTTTATTTATCTGGTCTTATTCATGGAAAGTATCCAAAGCGTGAAGTGCACAATCTTGCCCGCTTTATTTCTGTTATGAAGTTTCATCCTCTATCTTGGCGAACTTCCCACCCTTATGTTTTGGTGGATCGGTTTGAAGATATTACTCCTGCTGAAAGAGTTATAGAAAATAAGAAATGTGACAGAAAAGTCACACTTTATGGTTATCTGAGAGGTTGTAATTTGAAAAGGGGAAATAAGGTGCACATAGCAGGAGTGGGTGATCATAGTTTAGCTGCTATCACTCTGTTACCTGATCCTTGTCCTCTACCATCTGCTGCAAAGAAGAAGGGACTGCGAGATAGGGAAAAGTTATTCTACGCTCCCATGTCTGGCCTTGGGGATCTTCTATATGACAAAGATGCTGTGTACATAAATATTAACGATCACTTAGTCCAGTTCTCAAAAGTTGATGACGAAAACTCATCCATGGCAGGCAAAGGAAAGGACAGAGATGTAGGGGAGGTTTTGGTGAGATCACTTCAGAATACCAAGTACTCAATCAATGAAAAACTAGAGAATAGCAATATCAATCTTTTTAGTCAAAAGTCAAATGTGTCATCTGAAGCACTACATGACGTACAAGGTAGAAATGTAGAAAATAATGAAATGGATATGGATGGTTCAGAATCTGATCAAGATGAAGCCGTTCCACCCAATGCCATAACAGACAGGGAAACTAGTGATTCTGAAGAAGATAGTGACAAAAGAGATGGTAAAGCTGCAACTGGAGTTCACTTAAAAGAATGTGTTGAGTTTCATGGTGGAAGACTTAGGAGAAGAGCAGTGTTTGGAAATGATGTTGATCAAAATGATTTGAAGGATTCAGATGAAGAGGACGGGGCTGTCAGTGATGACGCAGCATCATCTGACTTGGAATCTTCAGAAGAGAGCCATGATGATGATGCAGACGAAGATGATGTGGGAGAGGTTTCAAAGTGGAAGGAGTTGTTGGCTGAAAGAACTATCTTACGGCAAACTCGTAGCCTGATGCAACTTGTGTATGGGAAGTCTACTGTTAATTCAACCAATGTGAAGAAAGAGGATGACAGTAGTGAGGATGAAGAAAGTGAAGATGAATTTTTTAAGCCTAAAGAGGAAGTTAGAAAGAAAAAAATGAGAGAGGGATTAAATGGTGAAAATGTCAACACTGAGGACTGTTCTAAGACTGCAAAGTTTGTGAATGTTAAATGCTGGGAAGACAAAGATTTTGATCAAATTCGTGATCGTTTTGTTACTGGTGACTGGTCAAAAGCTGCACTTAGAAACCAAGTATCTGAGGCTACTACTGCAGATGACTTTGATGCTGTCTATGGTGACTTTGAAGATTTAGAAGACGGAGAGAAGTACGAGAGTCATCAGACAGATAGTGAAGTTACTGAAATGGTACAGAAGGGAGAGGACTTGGAAGCTGAAGAGCGGAGGCTCAAGAAACTCACTCTCCGTGCAAAGGTTTTGGCCCCTGCCCTGCTACACTTTTTTTTTTTGGTGGTGCAAAATCAAGTGCACTATGGGATTCTATTTGTGACCTTAATTTTGATCTACTTGAAGGAGGAAATTGAACTTCGGAAACAGATGAATATAGCTGAACTCGGTGATCTTGATGAGGCTACCCGATTAGAGATAGAAGGCTTTCAAACAGGAAGTTACCTAAGATTGGAGGTTCATGATGTCCCTTATGAGATGGTTGAATACTTTGATCCTTACCACCCAATATTAGTAGGAGGGATTGGTCTTGCAGAGGAAAATGTCGGATACATGCAGGCTAGGTTCAAGCGGCATAGGTGGCACAAGAAAGTTCTCAAGACTAGAGATCCTATAATTGTTTCTGTTGGATGGAGACGTTACCAGACAACCCCGGTTTATGCTATTGAGGATCATAATGGGAGGCACCGTATGCTTAAATACACTCCAGAACATATGCATTGCTTGGCTATGTTTTGTGGCCCTCTTGCCCCTCTCAATACTGGGATAGTTGCTGTTCAGAATTTATCAAACAATCAGGAATCATTTAGGATTATGGCAACTGCTGTTGTACATGAATTTAATCATTCAGCAAGGATAGTGAAGAAAATAAAGTTGGTCGGTTACCCTTGTAAGATATTCAAGAAGACAGCACTTATCAAGGATATGTTCACTTCGGATCTTGAAGTGGCTCGGTTTGAAGGTGCAGCTATTCGAACAGTCAGTGGGATCAGGGGGCAGGTCAAGAAGGCTGTAAAAGAAGATATCCACAAGCAGTCAAAGAAGAATGGAAGCAATCCGAAAGAAGGAATTGCTCGGTGCACCTTTGAGGACAAAATTTTGATGAGTGACATTGTTTTCTTGCGTGCCTGGACTCAAGTTGATGTTCCTCAGTTTTTTAATCCCTTAACAACAGCATTGCAGCCTCGTCAGCAGACCTGGCAAGGAATGAAAACAGTTGCTGAATTGAGAAAGGATTTCAAGCTTCCTGTACCTGTGAATAAAGATTCACTTTACAAGAAAATTGAAAGAAAGCCGCGGAAGTTCAATCCATTGGTGATTCCCAAGTCTCTACAGGAATCACTTCCTTTTGCGTCAAAACCTAAAGATATGCCTAGTCGAAAGCGGCGGTCACTTGCTGAGAGAAGGGCTGTTGTTCGGGATACTCATGAGCGTAAAGTCCATGCTCTTGTACAACAGCTCCAATTAATTAGAAATGAGAAGTTGAAAAAGCGAAAGCTGAAAGAGGAAGAGAAGAGGAAAGAACATGAAGCTGAGAGAGCAAAAGATGAGCAGTTGCAAAGGAAACGCCAAAGAGAAGAAAGGCGAGAGAGATATCGCGAGCAAGAAAAACAGAAGAAAATCCGGAGAGCAGAGGTATGA 3537 0.4156 MAVNEADQSHKPHRSRQSGAKKAKSDKKKKKQEVGDGHHKQNPKAFAFASSVKAKRLQSRAVEKEQRRLHVPIIDRSYGEPAPYVVVVQGPSKVGKSLLIKSLVKHYTKQNLPDVRGPITIVSGKQRRLQFVECPNDINGMIDAAKFADLALLLIDGSYGFEVETFEFLNILQVHGFPKVMGVLTHLDKFKDAKKLKKTKQRLKHRFWTEIYDGAKLFYLSGLIHGKYPKREVHNLARFISVMKFHPLSWRTSHPYVLVDRFEDITPAERVIENKKCDRKVTLYGYLRGCNLKRGNKVHIAGVGDHSLAAITLLPDPCPLPSAAKKKGLRDREKLFYAPMSGLGDLLYDKDAVYININDHLVQFSKVDDENSSMAGKGKDRDVGEVLVRSLQNTKYSINEKLENSNINLFSQKSNVSSEALHDVQGRNVENNEMDMDGSESDQDEAVPPNAITDRETSDSEEDSDKRDGKAATGVHLKECVEFHGGRLRRRAVFGNDVDQNDLKDSDEEDGAVSDDAASSDLESSEESHDDDADEDDVGEVSKWKELLAERTILRQTRSLMQLVYGKSTVNSTNVKKEDDSSEDEESEDEFFKPKEEVRKKKMREGLNGENVNTEDCSKTAKFVNVKCWEDKDFDQIRDRFVTGDWSKAALRNQVSEATTADDFDAVYGDFEDLEDGEKYESHQTDSEVTEMVQKGEDLEAEERRLKKLTLRAKVLAPALLHFFFLVVQNQVHYGILFVTLILIYLKEEIELRKQMNIAELGDLDEATRLEIEGFQTGSYLRLEVHDVPYEMVEYFDPYHPILVGGIGLAEENVGYMQARFKRHRWHKKVLKTRDPIIVSVGWRRYQTTPVYAIEDHNGRHRMLKYTPEHMHCLAMFCGPLAPLNTGIVAVQNLSNNQESFRIMATAVVHEFNHSARIVKKIKLVGYPCKIFKKTALIKDMFTSDLEVARFEGAAIRTVSGIRGQVKKAVKEDIHKQSKKNGSNPKEGIARCTFEDKILMSDIVFLRAWTQVDVPQFFNPLTTALQPRQQTWQGMKTVAELRKDFKLPVPVNKDSLYKKIERKPRKFNPLVIPKSLQESLPFASKPKDMPSRKRRSLAERRAVVRDTHERKVHALVQQLQLIRNEKLKKRKLKEEEKRKEHEAERAKDEQLQRKRQREERRERYREQEKQKKIRRAEV 1178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele32g0028 1178 MobiDBLite consensus disorder prediction 455 472 - -
Lele32g0028 1178 CDD BMS1 45 275 IPR037875 GO:0005525
Lele32g0028 1178 Pfam AARP2CN (NUC121) domain 232 317 IPR012948 GO:0005634|GO:0042254
Lele32g0028 1178 SMART aarp2cn2 232 318 IPR012948 GO:0005634|GO:0042254
Lele32g0028 1178 MobiDBLite consensus disorder prediction 502 516 - -
Lele32g0028 1178 Gene3D - 84 246 IPR027417 -
Lele32g0028 1178 Coils Coil 1105 1167 - -
Lele32g0028 1178 Pfam 40S ribosome biogenesis protein Tsr1 and BMS1 C-terminal 762 1013 IPR007034 -
Lele32g0028 1178 MobiDBLite consensus disorder prediction 431 472 - -
Lele32g0028 1178 MobiDBLite consensus disorder prediction 1126 1178 - -
Lele32g0028 1178 Coils Coil 692 712 - -
Lele32g0028 1178 FunFam BMS1 ribosome biogenesis factor 84 246 - -
Lele32g0028 1178 SMART DUF663_2 688 1012 IPR007034 -
Lele32g0028 1178 MobiDBLite consensus disorder prediction 573 597 - -
Lele32g0028 1178 MobiDBLite consensus disorder prediction 1087 1105 - -
Lele32g0028 1178 MobiDBLite consensus disorder prediction 498 538 - -
Lele32g0028 1178 MobiDBLite consensus disorder prediction 1 48 - -
Lele32g0028 1178 PANTHER RIBOSOME BIOGENESIS PROTEIN 6 1161 IPR039761 GO:0042254
Lele32g0028 1178 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 82 219 IPR027417 -
Lele32g0028 1178 MobiDBLite consensus disorder prediction 1081 1105 - -
Lele32g0028 1178 ProSiteProfiles Bms1-type guanine nucleotide-binding (G) domain profile. 82 246 IPR030387 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele32g0028 Lele-ChrLele32 193162 200967 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele29g0028 29 185652 197904 Lele32g0028 32 193162 200967 hybridization
Lele30g1364 30 15813116 15821081 Lele32g0028 32 193162 200967 hybridization