Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele32g0027 ATGGCGCAGCCATTACAGTTGGGCTCAGCTGCTGGAATGAGAGAGAGAACTTTTAGCAAGTCCATGTCCCTGCGCAAGCATCTCTCACTAGTGGCCCCGGAAATAGTATCAAACACCGCTGGTACTGCTGGCAGAGCAACCATGAATAACGATGACCGCATCCACAGCAGGCGGGAAGAAGATCAAAGCGCCCCAGATAGTACCGTCACAAGCCAGGACTCCAGATTCAGTCAGACCCTCAGGAATGTTCAAGGCTTACTGAAAGGTCGCAGCATCCCTGGTAAAATATTGTTGACCCGGAGACTAGACCCGCTAGATAATTCAAACTCGCCAAGATATGAAAGGAGCTTCTCCTTCAATGATGTTGGCACAAGTGATCACCCAGCTAAGGCTGCAGAGGAAGAAGTCCAGAGTACAAGTAAACCAGTCAGTGTTGCCAATGTGAATAAGTTAAAAAAATCAAGTTCTGACATGGATAACTCATTTGAAGAAGCCCAGAAACCTTTCATGGGTGCAAGAGCTACAGACTCTGCGAGAGTTATGAAGTTCACTAAGGTGCTTTCTGGGTCGACGGTAATATTAGAGAAGTTGCGTGAATTATCTTGGAGTGGAGTTCCAGATTACATGCGCCCTACCGTGTGGAGGCTTCTCTTGGGATATGCACCACCTAATTCAGATAGAAGGGAGGGAGTTCTGAGAAGGAAGCGCCTGGAGTATCTTGACTGTGTTTCTCAGTATTATGATATTCCTGATACACAACGTTCTGATGATGAGATTAACATGCTTCGCCAGATTGCCGTTGATTGTCCAAGAACTGTACCTGATGTTTCATTCTTCCAGCAACCACAAGTTCAGAAATCATTGGAGCGCATTCTTTATGCATGGGCCATTCGGCATCCTGCAAGTGGATATGTTCAGGGAATTAATGATCTTGTCACACCGTTTTTAGTTGTTTTCCTATCAGAATACTTAGAAGGGAGCATAGACAATTGGTCAATGCCTGATTTATCCTCGGATAAAATTTCTAATGTAGAGGCTGATTGTTATTGGTGCTTGTCGAAGTTGCTTGATGGTATGCAAGACCATTACACATTCGCTCAACCAGGAATTCAGAGGCTTGTTTTTAAGTTGAAGGAATTGGTCAGAAGAATAGATGAGCCTGTTTCTAGACATGTGGAGGAACAAGGACTGGAATTTCTTCAATTTGCTTTCCGCTGGTTCAACTGCCTTCTTATCCGTGAGATACCCTTCCATCTCATCACGCGCCTTTGGGACACATATCTTGCTGAAGGGGATGCCTTACCGGACTTCCTTGTGTATATATTTGCCAGTTTTCTTCTGACGTGGTCAGATAAGCTCCAGAAGCTTGATTTCCAAGAGCTGGTAATGTTCCTTCAACACCTTCCAACTCAAAACTGGTCTTACCAAGAGCTTGAGATGGTGCTCTCTCGCGCCTTCATGTGGCACAGCATGTTCAACAACTCTCCCAGCCATTTAGCTAGCTAA 1506 0.4522 MAQPLQLGSAAGMRERTFSKSMSLRKHLSLVAPEIVSNTAGTAGRATMNNDDRIHSRREEDQSAPDSTVTSQDSRFSQTLRNVQGLLKGRSIPGKILLTRRLDPLDNSNSPRYERSFSFNDVGTSDHPAKAAEEEVQSTSKPVSVANVNKLKKSSSDMDNSFEEAQKPFMGARATDSARVMKFTKVLSGSTVILEKLRELSWSGVPDYMRPTVWRLLLGYAPPNSDRREGVLRRKRLEYLDCVSQYYDIPDTQRSDDEINMLRQIAVDCPRTVPDVSFFQQPQVQKSLERILYAWAIRHPASGYVQGINDLVTPFLVVFLSEYLEGSIDNWSMPDLSSDKISNVEADCYWCLSKLLDGMQDHYTFAQPGIQRLVFKLKELVRRIDEPVSRHVEEQGLEFLQFAFRWFNCLLIREIPFHLITRLWDTYLAEGDALPDFLVYIFASFLLTWSDKLQKLDFQELVMFLQHLPTQNWSYQELEMVLSRAFMWHSMFNNSPSHLAS 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele32g0027 501 PANTHER TBC1 DOMAIN FAMILY MEMBER GTPASE-ACTIVATING PROTEIN 151 474 - -
Lele32g0027 501 ProSiteProfiles TBC/rab GAP domain profile. 204 431 IPR000195 -
Lele32g0027 501 MobiDBLite consensus disorder prediction 103 123 - -
Lele32g0027 501 MobiDBLite consensus disorder prediction 102 142 - -
Lele32g0027 501 MobiDBLite consensus disorder prediction 56 76 - -
Lele32g0027 501 SUPERFAMILY Ypt/Rab-GAP domain of gyp1p 367 489 IPR035969 -
Lele32g0027 501 Gene3D - 181 232 - -
Lele32g0027 501 SMART tbc_4 201 457 IPR000195 -
Lele32g0027 501 FunFam TBC domain containing protein 234 365 - -
Lele32g0027 501 FunFam TBC domain containing protein 366 501 - -
Lele32g0027 501 FunFam TBC1 domain family member 178 230 - -
Lele32g0027 501 Gene3D putative rabgap domain of human tbc1 domain family member 14 like domains 240 365 - -
Lele32g0027 501 Pfam Rab-GTPase-TBC domain 208 452 IPR000195 -
Lele32g0027 501 SUPERFAMILY Ypt/Rab-GAP domain of gyp1p 183 391 IPR035969 -
Lele32g0027 501 Gene3D - 366 501 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele32g0027 Lele-ChrLele32 185547 191437 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele29g0027 29 174617 182878 Lele32g0027 32 185547 191437 hybridization
Lele30g1365 30 15824709 15835184 Lele32g0027 32 185547 191437 hybridization