Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele31g1514 ATGAAGTTTCATCCTCTATCTTGGCGAACTTTCCACCCTTATGTTTTGGTGGATCGGTTTGAAGATATCACTCCTCCTGAAAGAGTTATAGAAAATAAGAAACGTGACAGAAAAGTCACACTTTATGGTTATCTGAGAGGGTGTAATTTGAAAAGGGGAAATAAGGTGCACATAGCAGGAGTGGGTGATCATATTTTAGCTGCAATCACTCTGTTACCTGATCCTTGTCCTCTACCATCTGCTGCAAAGAAGAAGGGACTGCGAGATAGGGAAAAGTTATTCTATGCTCCCACGTCTGGCCTTGGGGATCTTCTTTATGACAAAGATGCTGTGTACATAAATATTAATGATCACTTTGTCCAGTTTTCAAAAGTTGACGATGAAAACTCATCCATGGCAGGCAAAGGAAAGGACAGAGATGTAGGGGAGGATTTGGTGAGATCACTGCAGAATACTAAGTACTCAATCAATGAAAAACTAGAGAATAGCATTATCAATCTTTTTAGTCAAAAGTCAAATGTGTCGTCAGAAGCACTACATGACACACAAGGTAAAAATGTAGAAAATAATGAAATGGATATGGATGGTTCAGAATCTGATCAAGATGAAGCCGTTCCGCCCAATGCCATAACAGACAGTGAAACTAGTGGTTCTGAAGAAGATAGTGACACAAGAGATGGTAAAGCTGAAACTGGAGATCACTTAAAAGAATGTGATTCAGATGAAGAGGACGGGGCTGTCAGTGATGACCCAGCATCATCTGACTCGGAATTTTCTGAAGAGAGCCATGATGATGATGCAGATGGTACAGATCTTCATCTCATTGTTAAAATTTACGATGTGGGAGAGGTTTCAAAGTGGAAGGAGTTGTTGGCTGAAAGAACTGTCTTACGGCAAACTCCTAGCTTGATGCAACTTGTGTATGGGAAGTCTACTGTTAATTCAACCGATGTGAAGAAAGAGGATGACAGTAGTGAGGATGAAGAAAGTGAAGACGAATTTTTTAAGCCTAAAGAGGAAGTGAGAAAGCAAAAAATGAGAGAGGGATTAGATGGTGAAAATGTCAACACTGAGGACTGCTCCAAGACTGCAAAGCTTGTGGTTGTTAAATGCTGGGAAGACAAAGATTTTGAGCAAATTCGTGATCGTTTCGTTACTGGTGACTGGTCAAAAGCTGCCCTTAGAAACCAAGTATCTGAGGCTAATACTGGAGATGAATTTGATGCTGTCTATGGTGACTTTGAAGATTTAGAAGCTGGAGAGAAGTATGAGAGTAATCAGACAGATAGTGAAGTTGCTCAAATGTTGAAGGAGGAAATTGAACTTTGGAAACAGATGAATATAGCTGAACTCGATGATCTTGACGAGGCTACCCGAGTAGAGATAGAAGGCTTTCAAACAGGAAGTTACCTAAGATTGGAGGTTCATGATGTCCCCTATGAGATGGTTGAATACTTTGATCCTTACCACTCAATATTAGTAGGAGGGATTGGTCTTGCGGAGGAAAATGTCGGATACATGCAGGCTAGGTTCAAGCGGCATAGATGGCACAAGAAAGTTCTCAAGACTAGAGATCCTATAATTGTTTCTGTTGGATGGAGGCGTTACCAGACAACCCTGGTTTATGCTATTGAGGATCGTAATGGGAGGCATCGAATGCTTAAATACACTCCAGAACATATGCATTGCTTGGCTATGTTTTGGGGCCCTCTTGCCCCTCCCAATACTGGGATAGTCGCTGTTCAGAATTTATCAAACAATCAGGAATCATTTAGGATTACGGCAACTGCTGTTGTACTTGAATTTAATCATGCAGCAAGGATAGTGAAGAAAATAAAGTTGGTTGGTTACCCTTGTAAGATATTCAAGAAGACGGCACTCATCAAGGATATGTTCACTTCGGATCTTGAAGTGGCTCGGTTTGAAGGTGCAGCTATTCGAACAGTCAGTGGGATCAGGGGGCAGGCTGTAAAAGAAAATATCCATAAGCAGTCAAAGAAGAATGGAGTCAATCCCAAAGAAGGAATTGCTCGTTGCACCTTCGAGGACAAAATTTTGATGAGTGACATCGTTTTCTTGCGTGCATGGACTCAAGTTGATGTTCCTCAGTTTTTTAATCCCTTAACAACAGCATTGCAGCCTCGTCAGCAGGCCTGGCAAGGAATGAGAACAGTTGCTGAATTGAGAAAGGATTTCAAGCTTCCTGTACCTGTGAATAAAGATTCACTTTACAAGAAAATTGAAAGAAAGCCACGGAAGTTCAATCCATTGGTGATTCCCAAGTCTCTACCGGAATCACTTCCTTTTGTGTCAAAACCTAAAGATATACCTAGTCGAAAGCGGCGGTCACTTGCTGAGAGAAGGGCTGTTGGTCGGGATACTCATGAGCGTAAAGTTCATGCTCTTGTACAACAGCTCCAATTTATTAGAAATGAGAAGTTGAAAAAGCGAAAGCAGAAGGAGGAGGAGGAGAGGAAAGAACACGAAGCTGAGAGAGCAAAAGATGAGCAGTTGCAAAGAAAACGCCAAAGAGAGGAAAGGCGAGAGAGATATCGCGAGCAAGAAAAACAGAAGAAAATCCGGAGAGCAGAGGCATGA 2598 0.4169 MKFHPLSWRTFHPYVLVDRFEDITPPERVIENKKRDRKVTLYGYLRGCNLKRGNKVHIAGVGDHILAAITLLPDPCPLPSAAKKKGLRDREKLFYAPTSGLGDLLYDKDAVYININDHFVQFSKVDDENSSMAGKGKDRDVGEDLVRSLQNTKYSINEKLENSIINLFSQKSNVSSEALHDTQGKNVENNEMDMDGSESDQDEAVPPNAITDSETSGSEEDSDTRDGKAETGDHLKECDSDEEDGAVSDDPASSDSEFSEESHDDDADGTDLHLIVKIYDVGEVSKWKELLAERTVLRQTPSLMQLVYGKSTVNSTDVKKEDDSSEDEESEDEFFKPKEEVRKQKMREGLDGENVNTEDCSKTAKLVVVKCWEDKDFEQIRDRFVTGDWSKAALRNQVSEANTGDEFDAVYGDFEDLEAGEKYESNQTDSEVAQMLKEEIELWKQMNIAELDDLDEATRVEIEGFQTGSYLRLEVHDVPYEMVEYFDPYHSILVGGIGLAEENVGYMQARFKRHRWHKKVLKTRDPIIVSVGWRRYQTTLVYAIEDRNGRHRMLKYTPEHMHCLAMFWGPLAPPNTGIVAVQNLSNNQESFRITATAVVLEFNHAARIVKKIKLVGYPCKIFKKTALIKDMFTSDLEVARFEGAAIRTVSGIRGQAVKENIHKQSKKNGVNPKEGIARCTFEDKILMSDIVFLRAWTQVDVPQFFNPLTTALQPRQQAWQGMRTVAELRKDFKLPVPVNKDSLYKKIERKPRKFNPLVIPKSLPESLPFVSKPKDIPSRKRRSLAERRAVGRDTHERKVHALVQQLQFIRNEKLKKRKQKEEEERKEHEAERAKDEQLQRKRQREERRERYREQEKQKKIRRAEA 865
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele31g1514 865 MobiDBLite consensus disorder prediction 173 268 - -
Lele31g1514 865 Coils Coil 792 865 - -
Lele31g1514 865 Pfam AARP2CN (NUC121) domain 1 75 IPR012948 GO:0005634|GO:0042254
Lele31g1514 865 PANTHER RIBOSOME BIOGENESIS PROTEIN 1 848 IPR039761 GO:0042254
Lele31g1514 865 MobiDBLite consensus disorder prediction 218 241 - -
Lele31g1514 865 SMART aarp2cn2 1 76 IPR012948 GO:0005634|GO:0042254
Lele31g1514 865 MobiDBLite consensus disorder prediction 314 356 - -
Lele31g1514 865 MobiDBLite consensus disorder prediction 774 797 - -
Lele31g1514 865 MobiDBLite consensus disorder prediction 768 797 - -
Lele31g1514 865 SMART DUF663_2 400 699 IPR007034 -
Lele31g1514 865 MobiDBLite consensus disorder prediction 813 865 - -
Lele31g1514 865 Pfam 40S ribosome biogenesis protein Tsr1 and BMS1 C-terminal 423 700 IPR007034 -
Lele31g1514 865 MobiDBLite consensus disorder prediction 335 355 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele31g1514 Lele-ChrLele31 20360310 20366745 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele29g0028 29 185652 197904 Lele31g1514 31 20360310 20366745 hybridization
Lele30g1364 30 15813116 15821081 Lele31g1514 31 20360310 20366745 hybridization