Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele31g1457 ATGCGCAAAGTAAAGTATACGCAACAAAATTTTCATGAAAAGCTCTCCACTATCATTGATGAGTTCCCTCGGCTTGATGGTATTCACCCATTCTATGGTGATCTCCTCCATGTTCTCTACAACAAGGACCATTACAAGCTTGCACTTGGACAAATCAATACTGCTAGAAACCTTATTGGGAAGATCTGTAAGGACTATGTCAAGTTATTGAAGTATGGCGATTCACTATATAGATGCAAATGTCTGAAGGTTGCCGCTCTTGGCCGTATGTGCACCGTGATTAAGAGGATTGGCCCAAGTTTGGCTTATCTAGAGCAGGTGAGACAGCACATGGCAAGGCTCCCATCAATAGATCCAAACACGAGGACTCTCTTGATTTGTGGTTACCCTAATGTTGGCAAGAGCTCATTCATCAACAAAATTACAAGAGCTGATGTGGATGTGCAGCCCTATGCTTTCACTACTAAGTCACTTTTTGTTGGCCATACAGACTACAAATACCTAAGGTACCAAGTAATTGATACACCAGGGATTCTGGACCGACCTTTTGAAGATCGGAACATTATTGAGATGTGCAGCATTACTGCCCTTGCTCATTTGCGAGCTGCTATATTGTTTTTCTTAGACATATCTGGATCGTGTGGTTATAGCATTGCACAACAGGCTGCTCTATTTCACAGCATTAAGTCTCTGTTTATGAACAAGCCATTAATAGTAGTCTGCAATAAAACTGATTTGCAACCGATGGAAGGGGTGTCTGAGGAAGACAAGAAGTTGATCATGGAGATGAAAGCTGAGGCCTTGAAGACTCTGGTTGGTCAAGGAGGTGAGCCTACAAACGATGAAAGTGTGTTGTTGACCATGAGCACTTTGACAGAAGATGGGGTAATTGCTGTAAAAAATGCAGCATGTGAAAGATTGTTAGATCAAAGGGTGGAGATAAAGATGAAGTCCAAAAGGATAAATGACTGCTTGAATAGATTTCATGTTGCAGTACCAAAACCACGTGACCAGAAGGAAAGGCCGCCTTGTATTCCTCCAGCAGTCTTAGAAGCTAAGGCCAAGGCTGCAGCAGAAAAGGAAAAGAGAAAAACTGAAAAGGATCTGGAAGATGAGAATGGTGGTGCAGGTGTATACTCAGCAAACCTGCGGAAGAACTATATTTTGGCTAATGATGAATGGAAAGAAGATGTACTGCCAGAAATTTTGGATGGTCACAATGTGTATGATTTCATTGATCCTGATATCCTGCATAGGCTTGAAGAATTGGAAAGGGATGACGGGCTAAGACAGGCTGAGGAGTTAGATGATGATTTTGAGATAGACGGAAATGAGTTGACTCCAGAGGAACAGGAAGCTTTAGCTGCAATAAGAAAAAAGAAAAGCTTGCTCATCCAAGAGCATAGGAAGAAAAAGAGTACTGCAGAGAGCAGGCCAATTGTTCCAAGAAAACATGACAAGGACAGGAAGTTTACCAGAGAAAGAATGGGAAGGCAGCTGTCATCTTTGGGGCTTGATCCTTCTTTGGCAATTGACAGAGCACGCAGCAGGTCTGTTTCTAGGAGAGGTAGGAAAAGGGAAAGATCTCCTGAAGGCAGAGGTGCTGATGTGATGGATATAGATGTTGACTCCAGCAAGAAGCAGCGTACTAGATCTAGATCAAGCACTTGTTTTCTGGGAAGCGTTCAATTGGAAAAACCCAAAGACGGTGAAAGTGATACGAAGGTTGATTTAGGCTTCTTGGAGACAGTATCCCGATTCTGGGAATGGCTTGTGACTGGTGCCAAGTTTGTTTTTGAATTGAGTTGCTGA 1812 0.4272 MRKVKYTQQNFHEKLSTIIDEFPRLDGIHPFYGDLLHVLYNKDHYKLALGQINTARNLIGKICKDYVKLLKYGDSLYRCKCLKVAALGRMCTVIKRIGPSLAYLEQVRQHMARLPSIDPNTRTLLICGYPNVGKSSFINKITRADVDVQPYAFTTKSLFVGHTDYKYLRYQVIDTPGILDRPFEDRNIIEMCSITALAHLRAAILFFLDISGSCGYSIAQQAALFHSIKSLFMNKPLIVVCNKTDLQPMEGVSEEDKKLIMEMKAEALKTLVGQGGEPTNDESVLLTMSTLTEDGVIAVKNAACERLLDQRVEIKMKSKRINDCLNRFHVAVPKPRDQKERPPCIPPAVLEAKAKAAAEKEKRKTEKDLEDENGGAGVYSANLRKNYILANDEWKEDVLPEILDGHNVYDFIDPDILHRLEELERDDGLRQAEELDDDFEIDGNELTPEEQEALAAIRKKKSLLIQEHRKKKSTAESRPIVPRKHDKDRKFTRERMGRQLSSLGLDPSLAIDRARSRSVSRRGRKRERSPEGRGADVMDIDVDSSKKQRTRSRSSTCFLGSVQLEKPKDGESDTKVDLGFLETVSRFWEWLVTGAKFVFELSC 603
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele31g1457 603 Gene3D - 115 326 IPR027417 -
Lele31g1457 603 Pfam NOGCT (NUC087) domain 363 416 IPR012973 -
Lele31g1457 603 Pfam NOG1 N-terminal helical domain 1 118 IPR041623 -
Lele31g1457 603 Pfam Nucleolar GTP-binding protein 1 (NOG1) 189 245 IPR010674 GO:0005525
Lele31g1457 603 PANTHER NUCLEOLAR GTP-BINDING PROTEIN 1 1 462 - -
Lele31g1457 603 CDD NOG 122 308 - -
Lele31g1457 603 FunFam Nucleolar GTP-binding protein 1 115 327 - -
Lele31g1457 603 PIRSF NOG1 1 575 IPR024926 -
Lele31g1457 603 MobiDBLite consensus disorder prediction 468 496 - -
Lele31g1457 603 PRINTS GTP1/OBG GTP-binding protein family signature 172 187 IPR006073 GO:0005525
Lele31g1457 603 PRINTS GTP1/OBG GTP-binding protein family signature 124 144 IPR006073 GO:0005525
Lele31g1457 603 PRINTS GTP1/OBG GTP-binding protein family signature 145 163 IPR006073 GO:0005525
Lele31g1457 603 Gene3D - 1 114 - -
Lele31g1457 603 ProSiteProfiles OBG-type guanine nucleotide-binding (G) domain profile. 122 308 IPR031167 GO:0005525
Lele31g1457 603 MobiDBLite consensus disorder prediction 514 553 - -
Lele31g1457 603 MobiDBLite consensus disorder prediction 465 497 - -
Lele31g1457 603 Coils Coil 355 375 - -
Lele31g1457 603 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 2 265 IPR027417 -
Lele31g1457 603 MobiDBLite consensus disorder prediction 524 550 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele31g1457 Lele-ChrLele31 20009050 20011342 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele29g0091 29 532358 536626 Lele31g1457 31 20009050 20011342 hybridization
Lele30g1305 30 15458753 15461628 Lele31g1457 31 20009050 20011342 hybridization