Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele31g1439 ATGTCGGGCGGGTTCTTTAGAGGTACTTCTGCGGATCAAGACACTCGGTTTTCTAACAAGCAGGCTAAGCTGCTGAAATCTCAGAAGTTCGCGCCAGAACTGGACCACCTGGTCGATATGACCAAGGTGAATATGGACGTAATAAAGCCGTGGATCACTATAAGGGTGACTGAACTTCTTGGGTTCGAGGATGAGGTGCTCATCAACTTCATTCATAGTCTTCTGGATGCGAAGGAAGTAAACGGGAAGGAGGTCCAAATACAAATTACTGGATTTATGGAGAAGAACACTGGAAAATTTATGAAAGATCTTTGGTCACTTCTTCTCAGTGCACAGAAAAATGCCAGTGGTGTTCCACAGCAGTTCTTGGATGCCAAAGAAGAAGAACTTAGGAAGAAGAAGGTCGAAAATGATAAAATAACAAGTGAACTTCAGAAGAAAAGAGATAAAGAAGGTAGAGAGTTCTTGCAAGAGAGGGTGAAGAAGATGGACGGTGAATTTGATGCCAAGGATACTGATACTGCGTCAGACCAAGTCTTGAAGCCCAGGGATTCAGCATATTACGTCCAAGATGGAAAAGAAACTGACAAAAGGAATGGTGTGAGATCAAGGAACAGGTATTCTAGATGTCCTCATTCACCAGCAATTTCCGCTTCACCTAACCGAGACTCACCTAGGTCAATGAGTAGATCATTTTCAAATTCCCGAAGCTATTCAGGTGACAGACAAAGGTCAAGAAGTACATCCGGGTTGCCTGAAGCACGTGGGCGCTCCATTTCTTCCGAAAGGATTAGTCGTTCACCACGAAGACAATCTATTTCTCCTCCTCGAAGGCATTCACCTTGGCGATCTCCTCGGAGAAGGTCATCTTATTCTAGGCGAAGATCCAGGTCTCGCTCGCATTATAGATCACCATCTTTGCGACGAAGAGCGCGTTCTCCATTTCATCATAGGTCACCATCTCCTATGAGAAGACGCAGATCACCCTCTCCTGCAAGAAGACGCAGATCACCCTCTCCTATGAGAAGGCGCGGATCACCCTCTCCTGTGAGAAGGCGCGGATCACCCTCTCCCGTGAGAAGGCGCGGATCACCCTCTCCCATGAGAAGACGTAGATCACCCTCTCCCGTGAGAAGACGCAGATCACCCTCTCCCGTGAGAAGACGCAGATCACCCTCTCCCATGAGAAGACGCAGATCAACTTCTCCATTGCATCATCACAGATCCCCATCACCCATACAACGACGAATGTCACCTTCTCCTATACGCAAAATGTCACCAAGACCCGTACGTCGAAGATCTCCCTCTCCCATGCCATCCCGTCCTCCTGTACGAAGAAGGTATAGAAGTAGAACCCCGCAACGCAGGTCTCCATCTCCTGTGATGCGTAGATCTCATGTTTCTGGTCGTAAATGGTCTCCAAGTCCTTCCCCAAGGAGGTCTCCTTTTTCAGGTGAATGGAGTTCCAAATCTCCTACACGACGGGTATCTCCATCACCAGTGAGGAGAAATGCTCCAAGACGACCAAGAAGTCCTGAGCAGTTTTCTGAAGGAAGAGTCAGAACACAAGACAGATTGTCACCTGCTGCTCGTCAATCCTCAAGTCCTGTTAGGAATGTTCAGAGATATAAGGATCACAACTCATTGCATTATAAATCACAAGGTTCATTATCCACACCAGAGAAGTCTCCAATCAGGTCAGTATCTCCACAAGCAAGGAATAAGACTGTTAGTGAAGACAGTAGTCCACATGAGAGCCCTCGGAAGCAAAGAGGGGAGATTTTGACCCGAGAGGGAAGTTTGAGCCCTTCTCAGAAATCAAGAATCCAGAAGCCTAGGCGTGATAGGCCAGAAACAAGTGAAGGAGCAGAAGAAACATACCATTCTAGAGAGAGCAGGGATCACAAATCAAGGTCTTCCCAAAGGAAAATGAAATATTTGTCCCCTGACAGTAAGCGGAAAGTTTCACCTGCAAAGACTCGTACTGAGGATATATTCTCTCCTGAAAGGGCAGCTGGGCATCTGGGTTCCGAATCGCGGGGATGTAATGATAATATTGATTTGAGCAAGAAAGGCCGGGAAATGAAGAGTGAAAAATCTTCTGGAAGGGATGCTGAAACTCCTACTCAACTTAAGTCACCAATGTATAAGGAATCTTTTTCTGGTGAGAAGCTTATTGAATCATATGATGTGGATAGCAAGAAATCTGGTGAGAAGTACCACTCACATTCAAGTTTTGCCAAGGGTAGTGATAAGCATGGAAAATCAGAAGTTGCTCAGGTTAAACAGAATGCTTCATGTGATTCTGATTGTGAGGAAAGCGGTAGGCATAGAAGAGAAGGAAAGGATAAGAGAAAGCACAAGAGATCTGATAGAAAGGTTGCTTCAGATGAAGAATCCATCTATGATTCTGAGTTAGAGAATAGGAAAGAGGCTAAGAGAAGGAAAAAGGAGGAGAGGAAACTGCGGAAGGAGGAGAAGCGTCGAAGACATGAGGAGAGACGGCGTAGAAAGGAAGAGCGGCGTGCAGGGAAGCTGAAAATTAAAAGTAAAACAGATGACTATACTTCAGATGAGGAGGAAGCTGAAAGAAATGATTTTCATCGAAGTGATAATGAAGAGACACCATGGGACCCAAAGAAGCTTGAGATTGAATTACGGAATAAGGCTCTCAAATCACTTAAGGCAAAGAAGGGCTTGAATCATTAA 2709 0.4559 MSGGFFRGTSADQDTRFSNKQAKLLKSQKFAPELDHLVDMTKVNMDVIKPWITIRVTELLGFEDEVLINFIHSLLDAKEVNGKEVQIQITGFMEKNTGKFMKDLWSLLLSAQKNASGVPQQFLDAKEEELRKKKVENDKITSELQKKRDKEGREFLQERVKKMDGEFDAKDTDTASDQVLKPRDSAYYVQDGKETDKRNGVRSRNRYSRCPHSPAISASPNRDSPRSMSRSFSNSRSYSGDRQRSRSTSGLPEARGRSISSERISRSPRRQSISPPRRHSPWRSPRRRSSYSRRRSRSRSHYRSPSLRRRARSPFHHRSPSPMRRRRSPSPARRRRSPSPMRRRGSPSPVRRRGSPSPVRRRGSPSPMRRRRSPSPVRRRRSPSPVRRRRSPSPMRRRRSTSPLHHHRSPSPIQRRMSPSPIRKMSPRPVRRRSPSPMPSRPPVRRRYRSRTPQRRSPSPVMRRSHVSGRKWSPSPSPRRSPFSGEWSSKSPTRRVSPSPVRRNAPRRPRSPEQFSEGRVRTQDRLSPAARQSSSPVRNVQRYKDHNSLHYKSQGSLSTPEKSPIRSVSPQARNKTVSEDSSPHESPRKQRGEILTREGSLSPSQKSRIQKPRRDRPETSEGAEETYHSRESRDHKSRSSQRKMKYLSPDSKRKVSPAKTRTEDIFSPERAAGHLGSESRGCNDNIDLSKKGREMKSEKSSGRDAETPTQLKSPMYKESFSGEKLIESYDVDSKKSGEKYHSHSSFAKGSDKHGKSEVAQVKQNASCDSDCEESGRHRREGKDKRKHKRSDRKVASDEESIYDSELENRKEAKRRKKEERKLRKEEKRRRHEERRRRKEERRAGKLKIKSKTDDYTSDEEEAERNDFHRSDNEETPWDPKKLEIELRNKALKSLKAKKGLNH 902
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele31g1439 902 SMART pwi_2 40 114 IPR002483 GO:0006397
Lele31g1439 902 MobiDBLite consensus disorder prediction 526 542 - -
Lele31g1439 902 MobiDBLite consensus disorder prediction 470 498 - -
Lele31g1439 902 SUPERFAMILY PWI domain 25 133 IPR036483 GO:0006397
Lele31g1439 902 MobiDBLite consensus disorder prediction 684 705 - -
Lele31g1439 902 MobiDBLite consensus disorder prediction 280 349 - -
Lele31g1439 902 PANTHER SERINE/ARGININE REGULATED NUCLEAR MATRIX PROTEIN 390 899 - -
Lele31g1439 902 MobiDBLite consensus disorder prediction 506 520 - -
Lele31g1439 902 Gene3D PWI domain 33 125 - -
Lele31g1439 902 MobiDBLite consensus disorder prediction 723 758 - -
Lele31g1439 902 ProSiteProfiles PWI domain profile. 27 125 IPR002483 GO:0006397
Lele31g1439 902 MobiDBLite consensus disorder prediction 187 203 - -
Lele31g1439 902 MobiDBLite consensus disorder prediction 815 844 - -
Lele31g1439 902 Pfam PWI domain 46 115 IPR002483 GO:0006397
Lele31g1439 902 MobiDBLite consensus disorder prediction 210 255 - -
Lele31g1439 902 MobiDBLite consensus disorder prediction 608 668 - -
Lele31g1439 902 Coils Coil 802 843 - -
Lele31g1439 902 MobiDBLite consensus disorder prediction 166 883 - -
Lele31g1439 902 MobiDBLite consensus disorder prediction 550 577 - -
Lele31g1439 902 MobiDBLite consensus disorder prediction 790 814 - -
Lele31g1439 902 MobiDBLite consensus disorder prediction 578 595 - -
Lele31g1439 902 Coils Coil 123 150 - -
Lele31g1439 902 MobiDBLite consensus disorder prediction 845 883 - -
Lele31g1439 902 MobiDBLite consensus disorder prediction 364 412 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele31g1439 Lele-ChrLele31 19900871 19905466 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele29g0111 29 660414 664907 Lele31g1439 31 19900871 19905466 hybridization
Lele30g1285 30 15347566 15352069 Lele31g1439 31 19900871 19905466 hybridization