Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele29g0111 ATGTCGGGCGGGTTCTTTAGAGGTACTTCTGCGGATCAAGACACTCGGTTTTCTAACAAGCAGGCGAAGCTGCTGAAATCTCAGAAGTTCGCGCCAGAACTGGACCACCTGGTCGATATGACCAAGGTGAATATGGACGTAATAAAGCCGTGGATCACGATAAGGGTGACTGAACTTCTTGGATTCGAGGATGAGGTGCTCATCAACTTCATTCATGGTCTTCTGGATGCGAAGGAAGTAAACGGGAAGGAGGTCCAAATACAAATTACTGGATTCATGGAGAAGAACACTGGAAAATTTATGAAAGATCTTTGGTCACTTCTTCTCAGTGCACAGAAAAATGCCAGTGGTGTTCCACAGCAGTTCTTGGATGCCAAAGAAGAAGAACTTAGGAAGAAGAAGGTCGAAAATGATAAAATAACAAGTGAACTTCATAAGAAAAGAGATAAAGAAGGTAGAGAGTTCTTGCAAGAGAGGGTGAAGAAGATGGACGGTGGATTTGATTCCAAGGATACTGATACTGCTTCAGATCAAGTCTTGAAGCCCAGGGATTTAGCAGATTACGTCCAAGATGGGAAAGAAACTGACAAAAGGAACGGTGTGAGATCAAGGAACAGGTATTCTAGATCTCCTCATTCGCCAGCAATTTCCGCTTCACCTAACCGAGACTCACCTAGGTCAATGAGTAGATCATTTTCAAATTCCAGAAGTTATTCAGGTGACAGACAAAGGTCAAGAAGTACATCTAGGTTGCCTGAAGCACGCGGGCACTCCATTTCTTCTGAAAGGATTCGTCGTTCACCACGAAGACAATCTATTTCTCCTCCTCGAAGGCATTCACCGTGGAGATCTCCTCGGAGAAGGTCATCTTATTCTAGGCGAAGATCCAAGTCTCACTCACATTACAGATCACCATCTTTGCGACGAAGAGCGCGTTCTCCATTTCGTCATAGGTCACCCTCTCCTCTAAGAAGACGCAGATCACGCTCTCCTGCAAGAAGACAGCAATCACCGTCTCCTGTGAGAAGGCGTGGATCACCCTCTCCCGTGAGAAGACACAGATCACCTTCTCCTGTGAGAAGGCACGGATCACCGTCTCCCATGAGAAGGCGCGGATCACCGTCTCCCGTGAGAAGGCGCAGATCACCCTCTCCCGTGAGAAGACGCAGATCACCCTCTCCCGTGAGAAGACGCAGATCACCCTCTCCCGTGAGAAGACGCAGATCACCTTCTCCATTGCGTCATCGCAGATCACCATCACCCATACAACGACGAATGTCACCTTCTCCTATACGCAAAATGTTACCAAGACCTGTACGTCGAAGATCTCCCTCTCTCATGCCATCCCCTTCTGTACGAAGAAGGTATAGAAGTAGAACCCCGCAACACAGGTCTCCATCTCCTGTGATGCGTAGATCTCATGTTTCTGGTCGTAAAAGGTCTCCAAGTCCTTCCCCAAGGAGGTCTCCTTTTTCAGGTGAATGGAGTTCCAAATCTCCTACACGATGGGTATCTCCATCACCGGTGAGGAGAAATGCTCCAAGACGAACAAGAAGTCCTGAGCAGTTTTCTGAAGGAAGAGTCAGAACACAAGACAGATTGTCACCTGCTGCTCGTCAATCCTCAAGTCCTGTCAGGAATGTTCAGAGAGATAAGGATCACAACTCATTGTGTTTTAAGTCACAAGGTTCATTATCCACACCTGAGAAGTCTCCAACCAGGTCAGTATCTCCACAAGCAAGGAATAAGACTGTTAGTGAAGACAGTAGTCCACATGAGAGCCCTCGGAAGCAAAGAGGGGAGATTTTGACCCGAGAGGGAAGTTTGAGCCCTTCTCAGAAATCAAGAATCCAGAAGCCTAGGCGTGATAGCCCAGAAACAAGTGAAGGAGCAGAAGAAACATACTATTCTAGAGAGAGCAGGGATCAAAAATCAATGTCTTCACAAAGAAAAATGAAATATTCGTCCCCTGACATTAAGCGGAAAGTTTCACTTCCAAAGACTCGTACTGAGGATATATTCTCTCCTGAAAGGGCAGCTGGGCGTCTGGGGCCCAAATCTCGGGGACTTAATGATAATATTGATTTGAGCAAGAAAGGCCGGGAAATGAAGAGTGATAAATCTTCTGGAAGGGATGCTGAAACTCCTACTCAACTTAAGTCACCAATGCATAAGGAATCTTTTTCTGGTGAGAAGCTTATTGAATCATATGATGTGGATAGCAAGACATCTGGTGAGAAGTACCACTCACATTCAAGTTTTGCCAAGGGTAGTGATAAGCAAGGCAAATCAGAAGTTGCTCAGGTTAAACAGAATGCTTCATGTGATTCTGATTCTGAGGAGAGCGGTAGGCATAGAAGAGAAGGAAAGGATAAGAGAAAGCACAAGAGATCTGAGAGAAAGGTTGCTTCAGATGAAGAATCCAGCTATGATTCTGAGTTAGATAACAGGAAAGAGGCTAAGAGAAGGAAAAAGGAGGAGAGAAAACTGCGGAAGGAGGAGAAGCGTCGAAGACGTGAGGAGAGACGGCGTAGAAAGGAAGAGCGGCATGCAGGGAAGCTGAAAATGAAAAGTAAAACAGATGGCTATACTTCAGATGGGGACGAAGCAGAAAGAAATGATTTTCATCGAAGTGATAATGAAGAGACACCATCTGACCCAAAGAAGCTTGAGATTGAATTACGAAATAAGGCTCTTGAATCACTTAAGGCAAAGAAGGGCTTGAATCATTAA 2733 0.4566 MSGGFFRGTSADQDTRFSNKQAKLLKSQKFAPELDHLVDMTKVNMDVIKPWITIRVTELLGFEDEVLINFIHGLLDAKEVNGKEVQIQITGFMEKNTGKFMKDLWSLLLSAQKNASGVPQQFLDAKEEELRKKKVENDKITSELHKKRDKEGREFLQERVKKMDGGFDSKDTDTASDQVLKPRDLADYVQDGKETDKRNGVRSRNRYSRSPHSPAISASPNRDSPRSMSRSFSNSRSYSGDRQRSRSTSRLPEARGHSISSERIRRSPRRQSISPPRRHSPWRSPRRRSSYSRRRSKSHSHYRSPSLRRRARSPFRHRSPSPLRRRRSRSPARRQQSPSPVRRRGSPSPVRRHRSPSPVRRHGSPSPMRRRGSPSPVRRRRSPSPVRRRRSPSPVRRRRSPSPVRRRRSPSPLRHRRSPSPIQRRMSPSPIRKMLPRPVRRRSPSLMPSPSVRRRYRSRTPQHRSPSPVMRRSHVSGRKRSPSPSPRRSPFSGEWSSKSPTRWVSPSPVRRNAPRRTRSPEQFSEGRVRTQDRLSPAARQSSSPVRNVQRDKDHNSLCFKSQGSLSTPEKSPTRSVSPQARNKTVSEDSSPHESPRKQRGEILTREGSLSPSQKSRIQKPRRDSPETSEGAEETYYSRESRDQKSMSSQRKMKYSSPDIKRKVSLPKTRTEDIFSPERAAGRLGPKSRGLNDNIDLSKKGREMKSDKSSGRDAETPTQLKSPMHKESFSGEKLIESYDVDSKTSGEKYHSHSSFAKGSDKQGKSEVAQVKQNASCDSDSEESGRHRREGKDKRKHKRSERKVASDEESSYDSELDNRKEAKRRKKEERKLRKEEKRRRREERRRRKEERHAGKLKMKSKTDGYTSDGDEAERNDFHRSDNEETPSDPKKLEIELRNKALESLKAKKGLNH 910
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele29g0111 910 MobiDBLite consensus disorder prediction 206 245 - -
Lele29g0111 910 Pfam PWI domain 46 115 IPR002483 GO:0006397
Lele29g0111 910 MobiDBLite consensus disorder prediction 692 713 - -
Lele29g0111 910 MobiDBLite consensus disorder prediction 479 506 - -
Lele29g0111 910 MobiDBLite consensus disorder prediction 346 421 - -
Lele29g0111 910 MobiDBLite consensus disorder prediction 725 758 - -
Lele29g0111 910 MobiDBLite consensus disorder prediction 246 269 - -
Lele29g0111 910 MobiDBLite consensus disorder prediction 616 676 - -
Lele29g0111 910 SUPERFAMILY PWI domain 25 133 IPR036483 GO:0006397
Lele29g0111 910 MobiDBLite consensus disorder prediction 586 603 - -
Lele29g0111 910 PANTHER SERINE/ARGININE REGULATED NUCLEAR MATRIX PROTEIN 1 380 - -
Lele29g0111 910 MobiDBLite consensus disorder prediction 853 891 - -
Lele29g0111 910 MobiDBLite consensus disorder prediction 823 852 - -
Lele29g0111 910 SMART pwi_2 40 114 IPR002483 GO:0006397
Lele29g0111 910 ProSiteProfiles PWI domain profile. 27 125 IPR002483 GO:0006397
Lele29g0111 910 MobiDBLite consensus disorder prediction 160 203 - -
Lele29g0111 910 Coils Coil 123 143 - -
Lele29g0111 910 MobiDBLite consensus disorder prediction 280 332 - -
Lele29g0111 910 MobiDBLite consensus disorder prediction 514 528 - -
Lele29g0111 910 MobiDBLite consensus disorder prediction 160 891 - -
Lele29g0111 910 Coils Coil 810 851 - -
Lele29g0111 910 MobiDBLite consensus disorder prediction 558 585 - -
Lele29g0111 910 MobiDBLite consensus disorder prediction 798 822 - -
Lele29g0111 910 MobiDBLite consensus disorder prediction 759 776 - -
Lele29g0111 910 Gene3D PWI domain 33 125 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele29g0111 Lele-ChrLele29 660414 664907 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele29g0111 29 660414 664907 Lele31g1439 31 19900871 19905466 hybridization
Lele29g0111 29 660414 664907 Lele32g0108 32 620857 626791 hybridization