Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele30g1285 ATGTCGGGCGGGTTCTTTAGAGGTACGTCTGCGGATCAAGACACTCGGTTTTCTAACAAGCAGGCGAAACTGCTGAAATCTCAGAAGTTCGCGCCTGAACTGGACCACCTGGTCGATATGACTAAGGTGAATATGGACGTAATAAAGCCGTGGATCACTATAAGAGTGACTGAACTTCTTGGGTTCGAGGATGAGGTGCTCATCAACTTCATTCATGGTCTTCTGGATGCGAAGGACGTAAACGGGAAGGAGGTCCAAATACAAATTACTGGATTTATGGAGAAGAACACTGGAAAGTTTATGAAAGAGCTTTGGTCACTTCTTCTCAGTGCGCAGAAAAATGCCAGTGGTGTTCCACAGCAGTTCTTGGATGCCAAAGAAGAAGAACTTAGGAAGAAGAAGGTGGAAAATGATAAAATAACAAGTGAACTTCAGAAGAAAAGAGATAAAGAAGGTAGAGAGTTCTTGCAAGAGAGGATGAAGAAGATGGACGGTGGATTTGATGCCAAGGATACTGATACTGCATCAGACCAAGTTTTGAAGCCCAGGGATTCAGTAGATTACGTCCAAGATGTAAAAGAAACTGACAAAAGGAACGGTGTGAGATCAAGGAACAGGTATTCTAGATCTCCTCATTCACCAGCATTTTCCGCTTCACCTAACCGAGACTCACCTAGGTCAAGGAGTAGATCATTTTCAAATTCCCGAAGTTATTCAGGTGACAGACAAAGGTCAAGAAGTACATCCAGGTTGCCTGAAGCACGTGGGCGCTCCATTTCTTCTGAAAGGATTCGTCATTCACCACGAAGACAATCTATTTCTCCTCCTCGGAGGCATTCACCGTGGCAATCTCCTTGGAGAAGGTCATTTTATTCTAGGCGAAGATCCGGGTCTCGCTCACGTTACAGATCACCATCTTTGCGTCGAAGAGTGCGTACTCCATCTCATCATAGGTCACCCTCTCCTGCAAGAAGACGCAGATCACCTGCTCCTGCAAGAAGACGCAGATCACGCTCTCCTGCAAGAAGACGTAGATCACCCTCTCCTTTGAGATCACCTTCTCCTGTGAGAAGGCGCAGATCACCCTCTCCCGTGAGAAGATGCAGATCGCCCTCTCCATTGCGTCATCGCAGATCATCATCACCCATACAACGACGAAGGTCACCTTCTCCTATACGCAAAATGTCACCAAGACCTGTACGTCGAAGATCTCCCTCTCCCATGCCATCCCCTTCTCCTGTACGAAGAAGGTATAGAAGTAGAACCCCACAACGAAGGTCTCCATCTCCTGTGATGCGCAGATCTCCTGTTTCTGATCGTAAATGGTCTCCAAGTCCTTCCCCAAGGAGGTCTCCTTCTTCAGGTGAATGGAGTTCCAAATCTCCTACACGACGTGTATCTCCATCACCTGTTAGGAGAAATGCTCCAAGACGAGCAAGAAGTCCTGAGCAGTTTTCTGAAGGAAGAGTCAGAACACAAGACAGATTGTCACATGCCGCTCATCAATCCTCTAGTCCTGTTAGGAATGTTCAGAGAGATAAGGATCACAACTCATTGCGTTATAAATCACAAGGTTCATTATCCACACCTGAGAAGTCTCCAACCAGGTCAGCATCTCCGCAAGCAAGGAATAAGACTGTTAGTGAAGACAGTAGTCCACATGAGAACCCTCGGAAGCAAAGAGGGGAGATTTTGACCCAAGAGGGAAGTTTGAGCCCTCCTCAGAAATCAAGAATCCAGAAGCCTAGGCATGATAGCCCAGAAAGAAGTGAAGGAGCAGAAGAAACATACTATTCTAGAGAGAGCAGGGATCACAAATCAAGGTCTTCACAAAGGAAAATGAAATATTTGCCCCCTGACGGTAAGCGGAAAGATTCACCTGCAAAGACTCGTACTGAGGATATATTCTCTCCTGAAAGGGCAGCTGGGCGTCTGGGTCCCGAATCTCGGGGACGTAATGATAATATTGATTTGAGCAAGAAAGGCCGGGAAATGAAGAGTGATAAATCTTCTGGAAGGGATGCTGAAACTCCTACTCAACTTAAGTCACCAATGTATACGGAATCTTTTTCTGGTGAGAAGCTTATTGAATCATATGATGTGGATAGCAAGAAGTCTGGTGAGAAGTACCACTCACATTCAAGTTTTGCCAAGGGTAGTGATAAGCATGGCAAATCAGAAGTTGCTCAGGTTAAACAGAATGGTTCATGTGATTCTGATTCTGAGGAAAGCGGTAGGCATAGAAGAGAAGGAAAGGATAAGAGAAAGCACAAAAGATCTGAGAGAAAGGTTGCCTCAGATGAAGAATCCAGCTATGGTTCTGAGTTAGAGAACAGGAAAGAGGCTAAGAGAAGGAAAAAGGAGGAGAGGAAACTGCGGAAGGAGGAGAAGCGTCGAAGACGTGAGGAGAGACGACGTAGAAAGGAAGAGCGGCGTTCAGGGAAGCTGAAAATGAAAAGTAAAACAGATGACTATACTTCAGATGAGGAGGAAGCTGAAAGAAATGATTTTCATCAAAATGATAATGAAGAGACACCATCTGACCCAAAGAAGCTTGAGATTGAATTACGAAATAGGGCTCTTGAATCACTTAAAGCAAAGAAGGGCTTGAATCATTAA 2619 0.4528 MSGGFFRGTSADQDTRFSNKQAKLLKSQKFAPELDHLVDMTKVNMDVIKPWITIRVTELLGFEDEVLINFIHGLLDAKDVNGKEVQIQITGFMEKNTGKFMKELWSLLLSAQKNASGVPQQFLDAKEEELRKKKVENDKITSELQKKRDKEGREFLQERMKKMDGGFDAKDTDTASDQVLKPRDSVDYVQDVKETDKRNGVRSRNRYSRSPHSPAFSASPNRDSPRSRSRSFSNSRSYSGDRQRSRSTSRLPEARGRSISSERIRHSPRRQSISPPRRHSPWQSPWRRSFYSRRRSGSRSRYRSPSLRRRVRTPSHHRSPSPARRRRSPAPARRRRSRSPARRRRSPSPLRSPSPVRRRRSPSPVRRCRSPSPLRHRRSSSPIQRRRSPSPIRKMSPRPVRRRSPSPMPSPSPVRRRYRSRTPQRRSPSPVMRRSPVSDRKWSPSPSPRRSPSSGEWSSKSPTRRVSPSPVRRNAPRRARSPEQFSEGRVRTQDRLSHAAHQSSSPVRNVQRDKDHNSLRYKSQGSLSTPEKSPTRSASPQARNKTVSEDSSPHENPRKQRGEILTQEGSLSPPQKSRIQKPRHDSPERSEGAEETYYSRESRDHKSRSSQRKMKYLPPDGKRKDSPAKTRTEDIFSPERAAGRLGPESRGRNDNIDLSKKGREMKSDKSSGRDAETPTQLKSPMYTESFSGEKLIESYDVDSKKSGEKYHSHSSFAKGSDKHGKSEVAQVKQNGSCDSDSEESGRHRREGKDKRKHKRSERKVASDEESSYGSELENRKEAKRRKKEERKLRKEEKRRRREERRRRKEERRSGKLKMKSKTDDYTSDEEEAERNDFHQNDNEETPSDPKKLEIELRNRALESLKAKKGLNH 872
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele30g1285 872 MobiDBLite consensus disorder prediction 206 245 - -
Lele30g1285 872 SMART pwi_2 40 114 IPR002483 GO:0006397
Lele30g1285 872 MobiDBLite consensus disorder prediction 578 638 - -
Lele30g1285 872 MobiDBLite consensus disorder prediction 760 784 - -
Lele30g1285 872 MobiDBLite consensus disorder prediction 563 577 - -
Lele30g1285 872 PANTHER SERINE/ARGININE REGULATED NUCLEAR MATRIX PROTEIN 377 869 - -
Lele30g1285 872 MobiDBLite consensus disorder prediction 246 269 - -
Lele30g1285 872 MobiDBLite consensus disorder prediction 161 203 - -
Lele30g1285 872 MobiDBLite consensus disorder prediction 292 345 - -
Lele30g1285 872 MobiDBLite consensus disorder prediction 274 291 - -
Lele30g1285 872 Gene3D PWI domain 33 125 - -
Lele30g1285 872 MobiDBLite consensus disorder prediction 548 562 - -
Lele30g1285 872 Pfam PWI domain 46 115 IPR002483 GO:0006397
Lele30g1285 872 MobiDBLite consensus disorder prediction 785 814 - -
Lele30g1285 872 MobiDBLite consensus disorder prediction 695 728 - -
Lele30g1285 872 Coils Coil 778 813 - -
Lele30g1285 872 ProSiteProfiles PWI domain profile. 27 125 IPR002483 GO:0006397
Lele30g1285 872 MobiDBLite consensus disorder prediction 476 496 - -
Lele30g1285 872 MobiDBLite consensus disorder prediction 521 547 - -
Lele30g1285 872 Coils Coil 123 150 - -
Lele30g1285 872 MobiDBLite consensus disorder prediction 645 675 - -
Lele30g1285 872 SUPERFAMILY PWI domain 25 133 IPR036483 GO:0006397
Lele30g1285 872 MobiDBLite consensus disorder prediction 440 468 - -
Lele30g1285 872 MobiDBLite consensus disorder prediction 815 856 - -
Lele30g1285 872 MobiDBLite consensus disorder prediction 360 383 - -
Lele30g1285 872 MobiDBLite consensus disorder prediction 161 856 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele30g1285 Lele-ChrLele30 15347566 15352069 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele30g1285 30 15347566 15352069 Lele31g1439 31 19900871 19905466 hybridization
Lele30g1285 30 15347566 15352069 Lele32g0108 32 620857 626791 hybridization