Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele31g1324 ATGAAGGAATGGGAATATGATGGTGACCGTCGTCGCAAGGTCCGGCGGCAGCTAAGGTGCGGTGCGGATGAACGACTTGGTTTTAAGTCTGCTGATCTGTCGTATTCATTACAGAAACTCAAAGATATGGCTAAGCTCAAACTCATTATCTTGGCTGCTTTCTTCATCTTGCTCATCACTATGGAAGTGGCCATTGCTGCCGCTGAAGGTGAAGGCAATGGAAAAGGCATGGAGAAGAAGGACGAGGAAAAGGAGAAGAAAGAAAAGGAAAAGGAGAAGAAACAAGAGAAGAAAGAAAAGGAGAAGGAGAAGAAAGAGAAGGAGAAGGAGAAGAAAAAAGAGAAGAAAGAAAAGGAAAAGGACAAGAAAGAAAAGGAAAAAGAGAAAAAGGCAAAGAGGGCATCAAGAGATGAAGCATCAAATTATAAGCAACTGTCGCCTCTGCCATCAGGACAAGAACGAGCTTTCTGCCTTGCACAAGGATCTTGTTATTATAAGACCCTTACTTGTCCAGCCGAGTGCGCACAAAGAAAGCCCAAGAAGAACAAGCAGCAAAAGGGTTGCTTCGTTGACTGCAGCAGCAAATGCGAAGCCACCTGCAAGTATAGAAAACCCAACTGCGATGGCTATGGATCTCTCTGCTACGACCCACGATTTGTTGGTGGTGACGGGGTTATGTTCTACTTCCATGGAGCCAAAGGTGGCAACTTTGCCATCGTCTCTGACGACAATCTCCAAATAAACGCCCATTTCATCGGATCTAGACCCCATGGAAGGACTCGTGACTACACATGGGTCCAAGCCATTTCTGTCATGTTCGAGACACACACCCTCGTTGTGGCAGCGAACAGAGTATCTCACTGGGACGATAATGTCGACTCTTTGATGGTACAATGGGATGGCGAAACAGTGAGCATTCCTACCGGTGATGATGCTGAATGGAAGAGTAACAGTGAAGAGAGAGAAGTTCAAGTGGAAAGAACAGATGAAACCAATAGTGTGAGAGTGAAAGTTTCACGCTTGTTAGAGGTGGACATTAAGGTAAGACCCATTGGAGAAGAAGAAAACAGAGTTCACAATTATCAGTTGCCTGCAGGTGATGCTTTTGCTCATTTGGAGACACAATTCAGATTCAAGAACCTCACAGATTTAGTTGAAGGAGTTTTGGGTAAGACTTACAGGCCAGACTACGTGAGCCCAGTGAAGAGAGGTGTTCCTATGCCAATGATGGGTGGAGAGGACAAATACAGAATTCCTTCTCTGTTTTCACCTTTCTGCAGAGTTTGCAGGTTCCAGAGATCATCTGGGTTTGCTGCTGATGAGGGAATCCTCGCTCAGTACTGA 1344 0.4546 MKEWEYDGDRRRKVRRQLRCGADERLGFKSADLSYSLQKLKDMAKLKLIILAAFFILLITMEVAIAAAEGEGNGKGMEKKDEEKEKKEKEKEKKQEKKEKEKEKKEKEKEKKKEKKEKEKDKKEKEKEKKAKRASRDEASNYKQLSPLPSGQERAFCLAQGSCYYKTLTCPAECAQRKPKKNKQQKGCFVDCSSKCEATCKYRKPNCDGYGSLCYDPRFVGGDGVMFYFHGAKGGNFAIVSDDNLQINAHFIGSRPHGRTRDYTWVQAISVMFETHTLVVAANRVSHWDDNVDSLMVQWDGETVSIPTGDDAEWKSNSEEREVQVERTDETNSVRVKVSRLLEVDIKVRPIGEEENRVHNYQLPAGDAFAHLETQFRFKNLTDLVEGVLGKTYRPDYVSPVKRGVPMPMMGGEDKYRIPSLFSPFCRVCRFQRSSGFAADEGILAQY 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele31g1324 447 Coils Coil 77 138 - -
Lele31g1324 447 MobiDBLite consensus disorder prediction 73 139 - -
Lele31g1324 447 Pfam Root cap 375 431 IPR009646 -
Lele31g1324 447 PANTHER ROOT CAP DOMAIN-CONTAINING PROTEIN 49 433 - -
Lele31g1324 447 MobiDBLite consensus disorder prediction 72 147 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele31g1324 Lele-ChrLele31 19259542 19261464 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele29g0227 29 1307725 1310597 Lele31g1324 31 19259542 19261464 hybridization
Lele30g1183 30 14681563 14682831 Lele31g1324 31 19259542 19261464 hybridization