Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele31g1236 ATGCAGCCCAATTTGTTCCCCTTTGGAAGCTTTCGGGGAAATCCGTTCATATTCAATGGTGATTTGAGTGAGGGATTTGAGAGCTCTAGGGTTTTCTTCGTAGTTCCTTTCTTGCTCTTCCAGGGAGGGGGAATGGATTTGTCCAAGGTCGGAGAAAAGATCCTGAGCTCTGTTAGGTCTGCGAGATCGCTTGGACTGCTCCCCTCTGTTTCTGATCGGCCGGAGGTTCCAGCTAGAGCTGCTGCCGCTGCAGCTGTTGCTCGTGCTCTCGCAGGATTGCCTCCTCATCAGCGGTATAGTCTCTCATCAAGTTCAGAAGAACTGAGTTCTATATTTGGAAGCAGAAATCATGGTCAAGAATTAGAGGAGCTTGAGGATGAATTCTATGAGGAGGATTTTGATCCAGTCAAGTATGTTTTAGAGCATGCTCCTGCTGAAGAAAATGAGCTTGCACATTTTGAGAAGCAGGCCACTCTTAGATTGGCACAGTTGGATAGAGTAGCAGAGTGTTTATCTCGCCACGTTATGGAGCATCATCAAGTTATGGCGCAAATGTATTCAATATTCGGGATGAATTTGGTCAGGGAACTGGAAAAAGACTTGAGGATTGCCAATGTCATCTGTATGAATGGAAGAAGACACTTGACCTCATCTATGAATGAAGTTTCAAGGGATCTTATTGTAAATTCTTATTCCAAAAAGAAACAAGCTCTTCTGGACATGCTTCCAGTTTTGACTGAGCTTCAACGTGCATTGGACATGCAATCAACACTTGAATCACTTGCTGAGGAGGGGAATTACTGCAAGGCATTTCAAGTTCTATCCGAGTTTCTGCAACTTTTAGATAGTTTGTCAGAATTTTCAGCAATACAAGAGATGACTCGTGGCGTGGAGGTTTGGCTGGAAAAAACTCTACAAAAACTGGATGCTCTTTTGTTGGGAGTGTGTCAGGAATTCAAGGAAGATAGCTATATAACTGTAATTGATGCCTATGCACTAATCGGGGATGTCACTGGTCTGGCTGAAAAGATACAAAGTTTCTACATGCAAGAAGTTATCTCAGAAACCCACTCTGTGTTGAAGGCTGTTGTGTATGAGGATAAGGAGGCACCTTCGCAAAATAGTAGGTTCACTTACAGTGACTTATGCCTTCAGATATCCGAATCTAAGTTTAGGCCTTGCTTATTAAGAACATTAGTTATTCTATTTGAGCTTATGCGTTCATACCATGAAATTATGGAGTTTCAGCTGGATAGACAGGACGCAGCAGGCCAAACTTCAAATAAAGACAATGATGATGTTTCCTGTAGGCCAGGTGGGGCTGGGGAGGTTGATGCAGATGTAAGAAATCGTAACATCTCTGGAGATGAAATTCATGGTTCACCTTCAAGAGAAGAATCTGAAACAGCCAGCTCACTGGTTGAAACTTCCAACTCTACTGCTTTACCATGTACAGATTCTCATGATCCAGTTAATGAGGCGATAAAGGAGGATAATGCAGCATCGAGCATTGAGTCCCCTTGGTACCATCTGCGCAAAGAAGCTACAGAATTTGTTTCACAGACCCTTAAACGAGGGCGCAAGAATCTTTGGCACCTCACTACTAGCCGCGTTTCAGTGTTGCTTTCTTCTGATGCAGCTTGTACCACAAGCATTCACCAATTCTTGAAAAATTACGAGGATCTCAGTGTCTTCATTTTGGCTGGGGAAGCCTTTTGCGGAAGTGAAGCAGTTGAATTTAGGCAGAAGTTGAAGGTGGTTTGTGAAAACTATTTCATAGCTTTTCATCGACAAAACATTCATGCACTCAAAATGGTTTTGGAGAAAGAGATGTGGTTAAAATTACCTCCAGATACATTGCAAATGATCAGTTTTTCCGGACTAGTTGGTGATGGAGCACCTTTGATTTCTTTGTCTAACCGCAAATCAGTAAACTTGGTTCACAGCCACAACAGCTCTAGGAAAAGTGGTTTCTCTTATTGGCTTCAAAATGGAAACCCATTTTTGCAGAAATTATCAACCCCTAGAGAAGGCCATTGTTTCCCCCAATCTAACGGTTCGACATATGGTGAACTTGATGGGAATTCAAACGGCAATTTTTATGGTGATAAAGTCTCGCCCAGAAAGAAAGATTCCAGTCAAATGAACGGTGCTAATTCAACTTCAGATGATGAAAATGAGGATCTTCTGGCAGACTTTATCGATGAGGACAGTCAACTTCCAAGTCGAAGTTCAAAACCCAATCATCCAAGAAGAAAGTCATTACATTGTAGTGATGAAGAAAATACAGCTCAAACTGGTTCTTCTCTAAGTCTTCTAAGATCTATGGATAAATATGCAAGGCTTATGCAGAAATTAGAAGTAGTAAATGTTGAATTCTTTAAGGGAATTTGCCAGTTATTTGAGATTTTTTTCAATTTTGTATATGAAACATTTGGTCAGTATAACACCGATTTCCATGGAAAAGGTTCGACTGATTCTCTTAACTATCGGCTAAGGACCGCCTTATCCAAAATAACACAAGATTGCGATCAGTGGATAAAGCTCCTGTCATCTTCACCTACTTCATCATTTGTACATTCAGAGGTAACACCTGCTGCCCCTCCCAGCACAAATTTGGGCAACTCGGCAGTGACATCTTTGGGTCTTAAGGAAAGATGTGTGGCTGTTGACACTATATCACTTGTTGCTCGAATATTGAATAGATCCAAAGCTCATCTCCAATCAATGCTTTTGCAAAGTAATGCTACTGTACTTGAGGATTTCTATCAGCATCTGGTGGATGCCGTACCAGATCTTGCAGAGCATATTCATAGGACAACGGCAAGACAACTACTGCACATCAATGGGTATGTTGAACGTGTTGCCAATTGTAGATGGGAAGTAAAAGAGCTTGGGCTAGAGCATAATGGGTATGTGGATCTGTTGCTTGGAGAATTTAAGCACTATAAAACACGTCTTGCTCATGGGGGAATTCGTCAAGAGATGCAAGACCTACTATTAGAAAATGGGCTTGAAATTGCGGCGGAAACTCTGGTAGAAGGACTTTCACGGGTAAAGAGATGTAGTGACGAAGGGCGAGCTTTAATGTCATTGGATCTGCAGGTTTTAATCAATGGACTGCATCATTTTGTGTCCATGAATGTGAAACCCAAGCTACAAATGGTTGAAACCTTCATTAAGGCTTACTATCTTCCAGAGACAGAATTTGTGCACTGGGCCCGCGCACACCCGGAATACACTAAAAGTCAGATTATTGGGTTGATAAACCTTGTTGCTACGATGAAAGGTTGGAAGAGAAAAACCAGGTCGGAAGTCTTGGAAAAGATTGAGTGA 3336 0.4191 MQPNLFPFGSFRGNPFIFNGDLSEGFESSRVFFVVPFLLFQGGGMDLSKVGEKILSSVRSARSLGLLPSVSDRPEVPARAAAAAAVARALAGLPPHQRYSLSSSSEELSSIFGSRNHGQELEELEDEFYEEDFDPVKYVLEHAPAEENELAHFEKQATLRLAQLDRVAECLSRHVMEHHQVMAQMYSIFGMNLVRELEKDLRIANVICMNGRRHLTSSMNEVSRDLIVNSYSKKKQALLDMLPVLTELQRALDMQSTLESLAEEGNYCKAFQVLSEFLQLLDSLSEFSAIQEMTRGVEVWLEKTLQKLDALLLGVCQEFKEDSYITVIDAYALIGDVTGLAEKIQSFYMQEVISETHSVLKAVVYEDKEAPSQNSRFTYSDLCLQISESKFRPCLLRTLVILFELMRSYHEIMEFQLDRQDAAGQTSNKDNDDVSCRPGGAGEVDADVRNRNISGDEIHGSPSREESETASSLVETSNSTALPCTDSHDPVNEAIKEDNAASSIESPWYHLRKEATEFVSQTLKRGRKNLWHLTTSRVSVLLSSDAACTTSIHQFLKNYEDLSVFILAGEAFCGSEAVEFRQKLKVVCENYFIAFHRQNIHALKMVLEKEMWLKLPPDTLQMISFSGLVGDGAPLISLSNRKSVNLVHSHNSSRKSGFSYWLQNGNPFLQKLSTPREGHCFPQSNGSTYGELDGNSNGNFYGDKVSPRKKDSSQMNGANSTSDDENEDLLADFIDEDSQLPSRSSKPNHPRRKSLHCSDEENTAQTGSSLSLLRSMDKYARLMQKLEVVNVEFFKGICQLFEIFFNFVYETFGQYNTDFHGKGSTDSLNYRLRTALSKITQDCDQWIKLLSSSPTSSFVHSEVTPAAPPSTNLGNSAVTSLGLKERCVAVDTISLVARILNRSKAHLQSMLLQSNATVLEDFYQHLVDAVPDLAEHIHRTTARQLLHINGYVERVANCRWEVKELGLEHNGYVDLLLGEFKHYKTRLAHGGIRQEMQDLLLENGLEIAAETLVEGLSRVKRCSDEGRALMSLDLQVLINGLHHFVSMNVKPKLQMVETFIKAYYLPETEFVHWARAHPEYTKSQIIGLINLVATMKGWKRKTRSEVLEKIE 1111
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele31g1236 1111 MobiDBLite consensus disorder prediction 673 769 - -
Lele31g1236 1111 MobiDBLite consensus disorder prediction 422 491 - -
Lele31g1236 1111 Pfam Vacuolar-sorting protein 54, of GARP complex 121 415 IPR019515 -
Lele31g1236 1111 PANTHER UNCHARACTERIZED 45 1111 IPR040047 GO:0032456|GO:0042147|GO:1990745
Lele31g1236 1111 MobiDBLite consensus disorder prediction 673 702 - -
Lele31g1236 1111 MobiDBLite consensus disorder prediction 465 486 - -
Lele31g1236 1111 MobiDBLite consensus disorder prediction 449 464 - -
Lele31g1236 1111 Pfam Protein of unknown function C-terminus (DUF2451) 881 1111 IPR019514 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele31g1236 Lele-ChrLele31 18649086 18664753 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele29g0312 29 1863479 1875700 Lele31g1236 31 18649086 18664753 hybridization
Lele30g1099 30 14099818 14111448 Lele31g1236 31 18649086 18664753 hybridization