Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele31g1223 ATGAGCTCTCTGCTTCCGACATCTAACACAGTCGGTGACGGAGCAGAGAATCCTCCAACAAGTGATCTACGTCTCGATCTTCCCGAGAAGCATGATGCCGACGCCGGAGCCCTCTTTGTTCTTAAATCTAAAGGATCGTGGGTGCACTGTGGTTACCACCTCACGACGTCGATAGTAGCTCCATCATTGCTGAGTATTCCATACGCCTTCACGTTCCTGGGTTGGACAGGCGGCATCATCTTCTTGGTTGTTGCTGCCATCGTCACCTTCTATAACTACAATTTATTGTCTCTGGTTCTTGAACATCATGCTCAGCACGGCCACCGCCTGCTCCGATTCCGAGACTTGGCTCACCACATTCTAGGGCCTGGATGGGGTCGGTATTTTGTGGGGCCCATTCAATTCGCGGTCTGCTACGGTGCTGTTGTAGCTTGCACTCTTCTGGGAGGACAATGCATGAAGGCAATATACTTGGTGGCAAACCCAAATGGGAATATGAAGCTATACGAGTTCGTGTTAATATTCGGATGCTTGATGCTCATATTAGCTCAGATACCATCGTTTCACTCGCTAAGGCACATCAATTTGGTATCTTTGGTTCTGTGCCTCGCTTACAGTGCTTGTGCTACTGGCGCTTCCATTTATATTGGTGACTCCTCCAAAGGCCCGCCAAAAGATTATTCTCTGCAGGGCGATACAGAGACTCGTCTTTTCGGAATCTTCAATGCCATCGCCATCATTGCCACCACCTACGGAAATGGAATCATTCCTGAAATTCAGGCAACAACGGCACCCCCTGTAAAAGGGAAGATGTTCAAGGGATTGTGTGTTTGTTACTCGGTACTTATAGCGACATTCTTCAGCGTCGCAATCTCTGGTTACTGGGCATTTGGGAACCATTCTGCTGGCCTCATTTTAAACAACTTTGTTGACAATGGGACGCCTTTGGTGCCCAGGTGGTTCATTTACATGACCAACATTTTCACCATAGCTCAGCTTTCGGCTGTTGGGGTGGTTTACTTGCAGCCTACGAACGAAATGATGGAACGAGCATTTTCAGACCCCAAAAGCGCAGAATTTTCGATGAGGAATGTGATCCCCAGAGTGATTTCTAGGTCACTGAGCACTGCTGTGGCGATTGTTATAGCCGCGATGCTTCCATTTTTTGGGGACGTAAACGCACTCATTGGTGCTTTTGGTTTCACTCCACTTGACTTCATATTGCCTGCGGTTTTCTTCAACCTCACTTTTAAGCCATCAAAACGAAGCCCCATTTTCTGGTTGAACGTCATTATTGCTGTCACTTTCTCTGCTGTGGGAGCTACAGCCGCTATTGCTGCAGTCAGACAAATAGTTCTTGATGCCAAAAATTACAGATTGTTTGCTAATGTATAA 1395 0.4724 MSSLLPTSNTVGDGAENPPTSDLRLDLPEKHDADAGALFVLKSKGSWVHCGYHLTTSIVAPSLLSIPYAFTFLGWTGGIIFLVVAAIVTFYNYNLLSLVLEHHAQHGHRLLRFRDLAHHILGPGWGRYFVGPIQFAVCYGAVVACTLLGGQCMKAIYLVANPNGNMKLYEFVLIFGCLMLILAQIPSFHSLRHINLVSLVLCLAYSACATGASIYIGDSSKGPPKDYSLQGDTETRLFGIFNAIAIIATTYGNGIIPEIQATTAPPVKGKMFKGLCVCYSVLIATFFSVAISGYWAFGNHSAGLILNNFVDNGTPLVPRWFIYMTNIFTIAQLSAVGVVYLQPTNEMMERAFSDPKSAEFSMRNVIPRVISRSLSTAVAIVIAAMLPFFGDVNALIGAFGFTPLDFILPAVFFNLTFKPSKRSPIFWLNVIIAVTFSAVGATAAIAAVRQIVLDAKNYRLFANV 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele31g1223 464 MobiDBLite consensus disorder prediction 1 16 - -
Lele31g1223 464 Pfam Transmembrane amino acid transporter protein 44 449 IPR013057 -
Lele31g1223 464 PANTHER OS05G0424000 PROTEIN-RELATED 46 440 - -
Lele31g1223 464 MobiDBLite consensus disorder prediction 1 26 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele31g1223 Lele-ChrLele31 18569886 18572593 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele31g1223 136 464 Organic Solute Cotransporters AT1G08230 66.465 7.03e-156 443
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele29g0320 29 1939505 1948141 Lele31g1223 31 18569886 18572593 hybridization
Lele30g1086 30 14031201 14033361 Lele31g1223 31 18569886 18572593 hybridization