Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele30g1086 ATGTATGAGGTTGTCCTGTTGTATAGGACCTGTAGTTGGGATACAGAGAAAAGAGAGAAGAAGAAGAAGGAGAAGATGAGCTCTCTGCTTCCGAACTCTAACGAAGTTGGTGATGGAGCAGAGAGTTCTCCATTGCTTGATCTTCCTGAAAGGCATGTTGCTGACGCCGGAGCCCTCTTTGTTCTTAAATTTAAAGGTGGCATCATCTGTTTGGTTGTTGGTGCCATCGTCACTTTCTATAACTACAACTTATTGTCGCTGGTTCTTGAACATAATGCCCAGCACGGCCACCGCCTGCTCCGATTCCGAGACCTGGCTCACCACATTTTAGGGCCCGGATGGGGTCGGTATTTTGTGGGGCCCATTCAATTCGCAGTGTGCTACGGTGCTGTTGTGGCTGGCAATCTTCTGGGAGGACAATGCATGAAGTTTCCACATGCATTGCAACTAGTTAATGGCATTTTTACCCAAAATCCTGCAGGTGACTCCTCCAAAGGCCCACCGAAAGATTATTCTCTGCCGGACGATACAGAGACTCGTCTGTTCGGAATCTTGAATGCTATTGCCATCATCGCCTCCACCTACGGAAATGGAATCATTCCTGAAATTCAGGCAACATTGGCACCTCCCATAAAAGGGAAGATGTTCAATGCATTATGTGTTTGTTACTTCGTACTTGCAGTGACATTCTTCAGCGTTGCAATCTCTGGTTACTGGGCATTTGGGAACCATGCTACTAGCTTCATCATAGACAACTTTGTTGACAACGGGATACCTTTGATGCCCAGATGGTTTATTTAA 801 0.4632 MYEVVLLYRTCSWDTEKREKKKKEKMSSLLPNSNEVGDGAESSPLLDLPERHVADAGALFVLKFKGGIICLVVGAIVTFYNYNLLSLVLEHNAQHGHRLLRFRDLAHHILGPGWGRYFVGPIQFAVCYGAVVAGNLLGGQCMKFPHALQLVNGIFTQNPAGDSSKGPPKDYSLPDDTETRLFGILNAIAIIASTYGNGIIPEIQATLAPPIKGKMFNALCVCYFVLAVTFFSVAISGYWAFGNHATSFIIDNFVDNGIPLMPRWFI 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele30g1086 266 Pfam Transmembrane amino acid transporter protein 170 256 IPR013057 -
Lele30g1086 266 PANTHER OS05G0424000 PROTEIN-RELATED 179 265 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele30g1086 Lele-ChrLele30 14031201 14033361 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele30g1086 50 262 Organic Solute Cotransporters AT5G41800 34.708 9.78e-43 149
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele30g1086 30 14031201 14033361 Lele31g1223 31 18569886 18572593 hybridization
Lele30g1086 30 14031201 14033361 Lele32g0306 32 1907258 1913140 hybridization