Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele29g0320 ATGGCATATGCAAACAAAACGGGTGTCACCCATTATCTTATAATTCAAACCTCGTCCATTAATCGGTCTGATATTAAATTGTATGCTAAGGAAAGCCGATTCCCTGGAACTTCCTTGGTGGAATTGGAAATGCTTCCATGTGGAGACGCTTTGTTTTTGTTTGTTATATGGGTTTTTGATGTAAGACAACTAGGAAGTCGAAGTAGTCGGCTTTGTGATTTTGTGAGACGGGTGGCATCATCTGCTTGGTGGTTCCAGCCATCGTCACCTTCTATAACTACAATTTATTGTCTCTGGGCCGGGATGGGGTCGGTATTTTGTGGGGCCCATTCAATTCGTGGTCTGCTACGGTACCGTTGTGGCTTTCACTCTTCTGGGAGGACAATGCATGAAGGCAATATACGTGGTGGCAAACCCAAATGGGAATATGAAGCTATACGAGTTCGTGTTAATATTCGGATGCTTGATGCTCATATTAGCTCAGATACCATCGTTTCACTCGCTACGGCACATCAGTTTGGTGTCTTTGGTTCTGTGCCTCGCTTACATTACGTTACACAAATTCCGACAGGTGACTCCTCCAAGGGCCCGCCAAAAGATTATTCTCTGCAGGGCGATACAGAGACTCGTCTGTTCGGAATCTTCAATGCCATCGCCATCATTGCCACCACCTACGGAAACGGAATCATTCCTGAAATTCAGGCAACAATGGCACCCCCTGTAAAAGGGAAGATGTTCAAGGGATTGTGTGTTTGTTACTCGGTACTTGTAGCGACATTCTTCAGCGTCGCAATCTCTGGTTACTGGGCATTTGGGAACCATTCTGCCGGCCTCATTTTAAACAACTTTGTTGACAATGGGACGCCTTTGGTGCCCAGGTGGTTCATTTACATGACCAACATTTTCACCATAGCTCAGCTTTCAGCTGTTGGGGTGGTTTACTTGCAGCCTACGAACGAAATGATGGAACGAGCATTTTCAGACCCAAAAAGCGCAGAATTTTCGATGCGGAATGTGATCCCCAGAGTGATTTCTCGGTCACTGAGCACTGCTGTGGCGATTGTTATGGCAGCGATGCTTCCATTTTTTGGGGACGTAAACGCACTCATTGGTGCTTTTGGTTTCACTCCACTGGACTTCATATTGCCTGCGGTTTTCTTCAACCTCACTTTTAAGCCATCAAAACGAAGCCCCATTTTCTGGTTGAACGTCATTATTGCTGTCACTTTCTCTGCTGTGGGAACTATAGCAGCTATTGCTGCAGTCCGACAAATAGTCCTTGATGCCAAAAATTACAGATTGTTTGCTAATTTTTTCAATTTAAAATTGCAATTGGAACCAACAAAGGGCCATGTTAATTTGGCAAGTGATGTCAAGTTTGAACCCTGCGACTTGTACTTGGGATACTGTGAAAGAGAGCAGAAGAAGAAGATGAAGTCTCTGCTTCCGACCTCTAATGAAGTTGGTGATGGGGCAGAGAGTTCTCCATTGCTTGATCTTCCTGAGAGGTGTGTTGCCGCTGCCGAAGCCCTCTTCGTTCTTAAATCTAAAGGTGGCGTCATCTGCTTGGCTGTTGCTGCCATCGTCACTTTCTATAACTACAACTTATTGTCTCTGGTCCTTGAACACCATGCCCAGCACGGCCACCACCTGCTCCGATTCACAGACTACAAGCCCAATTTAAATAGGCCAATCAAGTGGCTCAAGGAAAGGCCTGGGTGGGTTCGGTATTTTGTGGGGCCCATTCAATTCCGTGCTGTTGTGGCCGCGAATCTTTTGGGAGGACAATGCATGAATGAAATATACGTGGTGGCAAACCCAAATGGGAATACGAAGCTTTACAAGTTCGGGTTGATATTCGGATGCTTGATGTTCATATTAGCTCAGCTTCCATCGTTTCACTCGCTGAGGCACATTAATATGGGGTCTCTGGTTCTCTGCTTCCCCTCCAGTGCTTGTGCTACTGGCGCTTCCATTTATATTGGTGACTCCTCCAAAGGCCTACCAAAAGATTATACTCTGCAGGGCGATACAGAGACTCGTCTGTTCGAATCTTCAATGCTATTGCCATCATTGCCACCACCTACGGGAATGGAATCACTCCTGAAATTCAGACCTCAAAAGAGCAGAATTTTCGATGCGGAATGTGATCCCCAGAGTGATTTCTCGGTCACTGAGCGCTGCTCTGGCAGTTGTTATAGCAGCGATGCTTCCATTTTTGGGGACATAAACGCACTCATCGGTGCTTTTGGTTTCACTCCACTTGACTTCACCTTGCCTGCCGTTTTCTTCAACCTCACTTTTAAGCCATCAAAGCGAAGCCCCATTTTCTGGTTCAACTTCATTATTGCTGTCACTTTCTCTGCTTTGGGAGCTGTGGCAACTATTGCAGCCTTCTGA 2400 0.4604 MAYANKTGVTHYLIIQTSSINRSDIKLYAKESRFPGTSLVELEMLPCGDALFLFVIWVFDVRQLGSRSSRLCDFVRRVASSAWWFQPSSPSITTIYCLWAGMGSVFCGAHSIRGLLRYRCGFHSSGRTMHEGNIRGGKPKWEYEAIRVRVNIRMLDAHISSDTIVSLATAHQFGVFGSVPRLHYVTQIPTGDSSKGPPKDYSLQGDTETRLFGIFNAIAIIATTYGNGIIPEIQATMAPPVKGKMFKGLCVCYSVLVATFFSVAISGYWAFGNHSAGLILNNFVDNGTPLVPRWFIYMTNIFTIAQLSAVGVVYLQPTNEMMERAFSDPKSAEFSMRNVIPRVISRSLSTAVAIVMAAMLPFFGDVNALIGAFGFTPLDFILPAVFFNLTFKPSKRSPIFWLNVIIAVTFSAVGTIAAIAAVRQIVLDAKNYRLFANFFNLKLQLEPTKGHVNLASDVKFEPCDLYLGYCEREQKKKMKSLLPTSNEVGDGAESSPLLDLPERCVAAAEALFVLKSKGGVICLAVAAIVTFYNYNLLSLVLEHHAQHGHHLLRFTDYKPNLNRPIKWLKERPGWVRYFVGPIQFRAVVAANLLGGQCMNEIYVVANPNGNTKLYKFGLIFGCLMFILAQLPSFHSLRHINMGSLVLCFPSSACATGASIYIGDSSKGLPKDYTLQGDTETRLFESSMLLPSLPPPTGMESLLKFRPQKSRIFDAECDPQSDFSVTERCSGSCYSSDASIFGDINALIGAFGFTPLDFTLPAVFFNLTFKPSKRSPIFWFNFIIAVTFSALGAVATIAAF 799
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele29g0320 799 PANTHER OS05G0424000 PROTEIN-RELATED 516 665 - -
Lele29g0320 799 Pfam Transmembrane amino acid transporter protein 195 424 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele29g0320 Lele-ChrLele29 1939505 1948141 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele29g0320 740 798 Organic Solute Cotransporters AT1G08230 69.492 3.95e-20 90.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele29g0320 29 1939505 1948141 Lele31g1223 31 18569886 18572593 hybridization
Lele29g0320 29 1939505 1948141 Lele32g0306 32 1907258 1913140 hybridization