Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele31g1196 ATGGAGTTGGAAAGTGTAACACAGTTTCTCAGGGGAAAGACCATATTGGTCACCGGTGCAACAGGCTTCTTAGCAAAAGTATTTGTGGAGAAGTTATTAAGGATTCAGCCGGATTTGAAGAAATTGTATCTTCTTCTCAGAGCTTCTGGCCCTGAGGCAGCCACACAACGCATGCAGGATGAGATTATAAGGAAGGAGGTGTTTAGAGTTGTACGAGAGAAGTGGGGAGAAGATTTTGAATGTTTGATAGCAGAGAAGGTAGTTGCTGTTGCAGGAGATGTTTCTGTTGCAAATTTGGGGATTAAAGATGCAAGTCTTGAAAATATGTGGGAAGAAATAGACGTTATTGCCAACTTTGCTGCAAATACCAGTTTTGATGAAAGATTCGACATCGCAATGGAGATTAACACGATGGGGGCTTTGCATGTGTTAAACTTCGCCAAGAGTTGCAGTAGGGTCCAGGTTTTTCTTCAAGTATCAACTGCTTATGTTTGTGGAGAGCCTAAGGAAGGAGAAGTGATTAAAGAGGAACCTTTTCGGATGGGTCAAACCCTAAACGGGACCTCAAAAGTTTTGGACATTCAGGCTGAAAAGAGTTGGATGCAAACAACAATTGAACAACTCAGATCACAATATAGTGGCAATGACATGGCTATTACGTCTGCAATGAAAGATTTTGGAATTCAGAGGGCAAACTTGTACGGATGGCCAAACACTTACGTTTTCACAAAAGCAATGGGAGAGATGTTGCTGTCGCATTTTAAGAATGAGATTCCATTAGTTATTATACGTCCCACAATGATCACAAGTACCTACAAGGAACCCTTCCCTGGTTGGATTGAAGGTTTAAAAACACTTGATGCTGTAATTGGTGGCTATGGCAAAGGAAAACTAGAGTGCTTTCTTGGTCATCCCCAGGCAATTTTGGATGCGATACCAGCGGATATGGTGACAAATTGTATTCTGGCGGCAATGGCAATTCACTCATATAAAACATCAGACAAATACATATACCATGTTAGTTCATCATTAACAAATTCCCTAACAATCTCTTGTGCCCATGATCTTGCCTATCTTTATTTCAAAAACAAACCCTTGACTAACAAAAGTGGAAAGCCAATAATCATATCCAAGGGAATCTTTTTGCCAACTATGGCTAGTTTTCATGCTCACGTGATGATCCGATATGTTCTCCCTCTCAAGGTACTATCTTTGGTGAACCAAGTGTTTTGCAAGATCTTCAAGGATGTTTATAATCGAAATGATAGAAGATTAAAAATGGTGATACGAATGATCGAGCTCTACAAACCCTATGTATTTTTCAGGGCATTTTTTGATGATGCGAACGCAGAAGAATTACGAGAAAAAGCAAAGGTTCTAAAGGATGTTGGATTTGATTTAGAGTTTGATCCCAAGAGCATAGATTGGACGGACTATTTGACGAATGTCCACGTTCCTGGACTTGTCAACTACGCAATTAATCCATCTCCCAAATTGCCCAAATACTGA 1509 0.4016 MELESVTQFLRGKTILVTGATGFLAKVFVEKLLRIQPDLKKLYLLLRASGPEAATQRMQDEIIRKEVFRVVREKWGEDFECLIAEKVVAVAGDVSVANLGIKDASLENMWEEIDVIANFAANTSFDERFDIAMEINTMGALHVLNFAKSCSRVQVFLQVSTAYVCGEPKEGEVIKEEPFRMGQTLNGTSKVLDIQAEKSWMQTTIEQLRSQYSGNDMAITSAMKDFGIQRANLYGWPNTYVFTKAMGEMLLSHFKNEIPLVIIRPTMITSTYKEPFPGWIEGLKTLDAVIGGYGKGKLECFLGHPQAILDAIPADMVTNCILAAMAIHSYKTSDKYIYHVSSSLTNSLTISCAHDLAYLYFKNKPLTNKSGKPIIISKGIFLPTMASFHAHVMIRYVLPLKVLSLVNQVFCKIFKDVYNRNDRRLKMVIRMIELYKPYVFFRAFFDDANAEELREKAKVLKDVGFDLEFDPKSIDWTDYLTNVHVPGLVNYAINPSPKLPKY 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele31g1196 502 Pfam Male sterility protein 396 493 IPR033640 -
Lele31g1196 502 CDD FAR-N_SDR_e 13 365 - -
Lele31g1196 502 Pfam Male sterility protein 17 321 IPR013120 -
Lele31g1196 502 Gene3D - 4 366 - -
Lele31g1196 502 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 6 339 IPR036291 -
Lele31g1196 502 CDD FAR_C 394 491 IPR033640 -
Lele31g1196 502 PANTHER MALE STERILITY PROTEIN 2-RELATED 6 494 IPR026055 GO:0080019
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele31g1196 Lele-ChrLele31 18397221 18400134 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele31g1196 5 402 Acyl Lipid Metabolism Gene Families AT5G22500 53.500 2.09e-151 436
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele29g0343 29 2080684 2084465 Lele31g1196 31 18397221 18400134 hybridization
Lele30g1062 30 13862865 13874103 Lele31g1196 31 18397221 18400134 hybridization