Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele31g1190 ATGCCTAATGTTCTCGGAGACAAAGATGGATCCGGCGCTCTTAACTTCAAGATCTCTAGTTCATTGCCACATTTAGCAATACCGACTAGTTGTTCCGTTAAGCACGCCTTACCGATGAAGCGTTCGATTCGCCCTCTGTTTGGAGTTCTAATTGTCGTCGTCTTCGTCGCCACTCTCAGCTGCAGAACCTTTGTTCGGAGAGGCTTATTGTCCCTTGAGCTGGAGAGCAGAGTATGGGTTCAAGTTCCGGCAGCACCACCATTGAACGCGACGCTGCTAAAATACGCTGCCATCGACATCGGAGAAGAGAAGTCGAAGCAAGAAATCCAGCAGCTTCTGGATGGAAACTTTGGAAGTCAAGCCGGGTACCGTACGTTTGTCTCTTGGCGTAGATTCATTCACCATGAGATTACTGAAAAGGACCCTAGGAGACTACCGGCAACGATACGTTCTCCGTTGTTTTATAGGTATTGGCTAGATTTCCGAAAGGTTTTGAACGATTGGGCCAGGAAAAAGAGGTTTCAGCCTGGTATTATGTCCGATTTAACGCGGCTAGTGAAGCTTCCGATCGATAGGCACAATGGATTGGCGGGTTCTGACCGGCCATACTCGTCTTGTGCGGTGGTTGGCAACAGTGGGATTTTGCTGAACAGCGACTATGGGAAGCTCATTGATAGCCATGAAGCAGTTATCCGATTGAACAATGCAAGGGTTGAGAAGTTTGAGAAGAAAGTGGGGTCTAAAACAAGCATTTCCTTCGTAAATAGCAACATGTTGCATCTCTGTGCAAGGAGGACAGAATGCTTTTGCCACCCATATGGAGCTAATGTGCCGATGGTTATGTACATTTGCCAACCAGCTCATTTCTTGGATTACACGGTTTGCAATACCTCGCACAAAGCACCATTGTTGGTCACCGATCCACGGTTCGATATGTTGTGTGCTCGGATTGTGAAGTACTACTCCTTGAAGAGGTTTGTGGAGGAGACAGGGAAGGCTTTGGAAGAATGGAGCTCTGCACATGATGGTGCTCTATTTCATTACTCTTCTGGTATGCAAGCTGTTATGTTAGCTTTAGGAATCTGTGATAGAGTCAGTATATTTGGGTTTGGCAAGTCTGCCTCAGCTAGGCATCATTATCATACGAATCAGAAGGCTGAACTTCATTTGCATGATTATGAAGCAGAATATGCGTTTTACAGGGACCTGGTCGATGGACACAGAGCAATACCTTTTCTCTCGGACAAATTCAAGATTCCACCCGTTGTTTTGTATCAGTGA 1281 0.4629 MPNVLGDKDGSGALNFKISSSLPHLAIPTSCSVKHALPMKRSIRPLFGVLIVVVFVATLSCRTFVRRGLLSLELESRVWVQVPAAPPLNATLLKYAAIDIGEEKSKQEIQQLLDGNFGSQAGYRTFVSWRRFIHHEITEKDPRRLPATIRSPLFYRYWLDFRKVLNDWARKKRFQPGIMSDLTRLVKLPIDRHNGLAGSDRPYSSCAVVGNSGILLNSDYGKLIDSHEAVIRLNNARVEKFEKKVGSKTSISFVNSNMLHLCARRTECFCHPYGANVPMVMYICQPAHFLDYTVCNTSHKAPLLVTDPRFDMLCARIVKYYSLKRFVEETGKALEEWSSAHDGALFHYSSGMQAVMLALGICDRVSIFGFGKSASARHHYHTNQKAELHLHDYEAEYAFYRDLVDGHRAIPFLSDKFKIPPVVLYQ 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele31g1190 426 Gene3D Glycosyl transferase family 29 150 409 IPR038578 -
Lele31g1190 426 Pfam Glycosyltransferase family 29 (sialyltransferase) 184 405 IPR001675 GO:0006486|GO:0008373
Lele31g1190 426 PANTHER BETA-1,6-GALACTOSYLTRANSFERASE GALT29A 39 426 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele31g1190 Lele-ChrLele31 18338725 18340005 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele31g1190 201 370 Glycosyltransferase AT3G48820 25.294 1.47e-09 57.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele29g0350 29 2145393 2147032 Lele31g1190 31 18338725 18340005 hybridization
Lele30g1057 30 13837164 13838441 Lele31g1190 31 18338725 18340005 hybridization