Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele31g1097 ATGTTAGATTTCGTTCATTCTGCATACGCTGGGCTCGTTTTGGGGATCTTGAACTCTCTATTTCTCTATCTTCTCCACACTAGCGGAATTGTTGCCATGGCTAAGAGTTCATTCAAGATGGAACACCCCCTTGAAAGGAGGCAGGCTGAAGCTGCTCGCATCAGAGAAAAGTATCCTGATAGAATACCGGTGATCGTTGAAAGGGCTGAAAAGAGTGACGTTCCTGAAATTGATAAGAAAAAGTATCTGGTTCCTGCTGATCTGACTGTTGGACAGTTTGTGTATGTTGTGAGAAAGAGAATCAAGCTGAGTCCTGAGAAGGCCATCTTTATCTTCGTCAAGAACATTTTACCTCCGACTGCTGCTATGATGTCTGCAATTTATGAGGAAAATAAGGATGAAGATGGGTTCCTGTACATGACTTACAGCGGGGAGAACACGTTCGGGATGATGGAATAA 459 0.4357 MLDFVHSAYAGLVLGILNSLFLYLLHTSGIVAMAKSSFKMEHPLERRQAEAARIREKYPDRIPVIVERAEKSDVPEIDKKKYLVPADLTVGQFVYVVRKRIKLSPEKAIFIFVKNILPPTAAMMSAIYEENKDEDGFLYMTYSGENTFGMME 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele31g1097 152 PANTHER MICROTUBULE-ASSOCIATED PROTEINS 1A/1B LIGHT CHAIN 3-RELATED 35 150 IPR004241 -
Lele31g1097 152 SUPERFAMILY Ubiquitin-like 35 149 IPR029071 -
Lele31g1097 152 FunFam Autophagy-related protein 33 149 - -
Lele31g1097 152 Gene3D - 26 150 - -
Lele31g1097 152 CDD Ubl_ATG8 44 146 - -
Lele31g1097 152 Pfam Autophagy protein Atg8 ubiquitin like 46 149 IPR004241 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele31g1097 Lele-ChrLele31 17734172 17736578 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele29g0445 29 2709591 2712908 Lele31g1097 31 17734172 17736578 hybridization
Lele30g0960 30 13236473 13239912 Lele31g1097 31 17734172 17736578 hybridization