Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele29g0445 ATGGCTGTGAAATCTTGTCATATTCCTGGGTCAACAAATTCTCAAGTTGGCTGGCATAGTTTATTGACTAAACATTCTGGGATTGCATTAAAGTGGGGCAGCTGGCAGAAAAGGGCCCGCAATTGGGGAAATAAGGTGATTGTACGGATGGTTGATCAGACGAGCCATGATACTTCCAAGGGATTGTCGAAAGATTTAATCTCTCTTCCAAAACCATTGTCTGTATCTGATATTTTGGCTGCTTCTGATAATGATGCTGAAGTTCGAATATCATTCAAGGGGGTACCAGGTTCCTACAGTGAGGATGCAGCAATTAAAGCCTACCCTAATTGTGAGACAGTCCCATGTGGTGATTTTGAAGCGGCTTTTAAGGCTGTTGAATTATGGATTGCCGACAAAGTTATCATTCCCATTGAGAACACTTCAGGGGGAAGCCTTCATCGAAACTATGATTTACTTCTTCGCCATAGGCTGCACATTGTTGGTGAGGTGCAGCTGGCTATTAGTTTCTGCCTTCTTGCTCTGCCTGGAGTTAGAGCAGATTACTTAGAACGTGTTCTAAGCCATCCCCAGGCACTTGATCTTAGTGATGCCTTCCTTACTAAGTTAAATGTTGCTAGAGAAAGTGTTGATGATACCGCAAGTGCTGCTGAGTATGTAGCTTCAAATGGCCTGTACAAAGCTGGTGTGATTGCCAGTCGTCGAGCTGCAGAAATCTATGGGCTCAATGTACTTGCAGAAAGAATCCAAGATGATCCTGAAATTATCAGTCGTTATCTAATTCTTGCAAGGGATCCAATAATTCCAAGAGCTGATAAACCGTTTAAGACAAGTATAGTGTTTAGTTTGGACGAGGGTCCTGGGGTATTGTTTAAGGCATTGGCAGTGTTCGCATTGAGGGACATCAATTTGAGTAAGATTGAAAGTCGACCGCAAAGAAATCGACCATTAAGAGTGGTTGATGACTCCAACACTGGAACTGCCAAGTATTTTGACTACCTTTTCTATATTGATTTCGAGGCTTCCATGGCTGAGCCACGGGCACAAACTGCTCTAGGACATCTGCAGGAATTCGCCACATTCATTCGAGTTCTGGGCTGCTATGCTATGGATGCAACCATATAG 1125 0.4347 MAVKSCHIPGSTNSQVGWHSLLTKHSGIALKWGSWQKRARNWGNKVIVRMVDQTSHDTSKGLSKDLISLPKPLSVSDILAASDNDAEVRISFKGVPGSYSEDAAIKAYPNCETVPCGDFEAAFKAVELWIADKVIIPIENTSGGSLHRNYDLLLRHRLHIVGEVQLAISFCLLALPGVRADYLERVLSHPQALDLSDAFLTKLNVARESVDDTASAAEYVASNGLYKAGVIASRRAAEIYGLNVLAERIQDDPEIISRYLILARDPIIPRADKPFKTSIVFSLDEGPGVLFKALAVFALRDINLSKIESRPQRNRPLRVVDDSNTGTAKYFDYLFYIDFEASMAEPRAQTALGHLQEFATFIRVLGCYAMDATI 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele29g0445 374 FunFam Arogenate dehydratase 171 252 - -
Lele29g0445 374 Gene3D - 173 252 - -
Lele29g0445 374 Gene3D - 271 372 - -
Lele29g0445 374 ProSiteProfiles ACT domain profile. 278 369 IPR002912 -
Lele29g0445 374 PANTHER PREPHENATE DEHYDRATASE P PROTEIN 42 373 - -
Lele29g0445 374 SUPERFAMILY ACT-like 260 369 IPR045865 -
Lele29g0445 374 CDD PBP2_Ct-PDT_like 88 266 - -
Lele29g0445 374 ProSitePatterns Prephenate dehydratase signature 2. 304 311 IPR018528 GO:0004664|GO:0009094
Lele29g0445 374 SUPERFAMILY Periplasmic binding protein-like II 89 270 - -
Lele29g0445 374 Pfam Prephenate dehydratase 90 266 IPR001086 GO:0004664|GO:0009094
Lele29g0445 374 Gene3D - 82 172 - -
Lele29g0445 374 ProSiteProfiles Prephenate dehydratase domain profile. 89 264 IPR001086 GO:0004664|GO:0009094
Lele29g0445 374 FunFam Arogenate dehydratase 271 372 - -
Lele29g0445 374 CDD ACT_CM-PDT 276 368 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele29g0445 Lele-ChrLele29 2709591 2712908 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele29g0445 29 2709591 2712908 Lele31g1097 31 17734172 17736578 hybridization
Lele29g0445 29 2709591 2712908 Lele32g0427 32 2704366 2706183 hybridization