Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele31g1083 ATGGCTGCATCTTTCTCTGCGCCCTCATTGATAATGGAGGAGGAAGCAAGGTTTGAAGCTGAAGTAGCAGAGGTGCAAGCATGGTGGAACTGGGAGCGGTTCAGGCTAACCCGGCGACCATATTCGGCTAGGGACGTTGTGGCACTGCGAGGGAACCTCAGACAAACCTATGCGTCCAACGAAATGGCGAAGAAGCTATGGCGAACCCTCAAGACCCACCAAGCCAATGGCACAGCCTCAAGGACCTTCGGTGCACTCGACCCTGTTCAGGTCACCCAAATGGCTCCCCACTTGGATACCATCTACGTCTCCGGCTGGCAATGCTCCTCCACCGCCGCCACCACCAACGAACCCGGCCCCGACCTCGCCGATTACCCTTACGACACAGTCCCCAACAAGGTTACGTTAATACATCAGTCCTATTATATAATGTCACTCAAAGTGAAACACAACAATAATCATAACGTACATAAGATGAATAAATCAATAAACTATGATCTACGTACATTTCAGGTTGAACACCTATTCTTCGCCCAGCAATTCCATGACCGGAAACAGAGAGAAGAAAGAATGAGAATGAGCAGAGAAGAGAGAGCCAGAACCCCTTACGTTGATTACTTGAGACCCATCATAGCCGACGGCGATACTGGCTTTGGTGGCACTACAGCCACCGTCAAGCTCTGCAAGCTTTTTGTTGAATGTGGTGCTGCTGGTGTTCACATTGAAGATCAATCCTCTGTGACCAAAAAATGTGGTCACATGGCCGGAAAAGTTCTAGTAGCCATTAGTGAACACATCAACAGGCTCGTGGCTGCAAGGCTGCAATTTGATGTAATGGGAGTGGATACGGTACTCGTGGCTCGAACTGATGCAGAAGCAGCGACACTGATTCAGTCTAATATAGACACTAGGGACCATCAGTTTATACTGGGAGTGACCAACCCTAGCCTGAGAGGAAAAGGCTTGGCCACTCTCATGGCAGAGAACATGGCTGCTGGGAAAAACGGAGCTGAGCTTCAGGCTATTGAAGACCAGTGGCTATCAATAGCAAAGTTGAAAACTTTTTCAGAGGCAGTTGAGGATGCAATTAAGAGCATGAACATAGGGGGAGAAGATATGAAAAGGAGGTTGAATGAATGGATGAGATATTCTAGTTATGAGAAGTGTTTGTCCAATGAGGAAGGAAGAGAGATTGCAGAGAGATTGGGACTGAGAAACCTATTCTGGGATTGGGACTTGCCAAGAACAAGAGAAGGGTTTTACAGATTCAAAGGGTCTGTTAAAGCAGCAATTGTCCGTGGATGGTCTTTTGCTCCACATGCAGATTTGTTATGGATGGAAACCAAAGGCCCAAATTTGGTTGAGTGCACTCAATTTGCTGAAGGTGTTAAGTCTAAACACCCAGAGATGATGCTGGGTTATAATCTATCTCCATCATTTAACTGGGATGCTTCGGGAATGAGTGATGAACAAATGATTGAGTTCATACCCAGAATTGCAAAGTTGGGGTATGTGTGGCAGTTCATAACAGTGGGTGGTTTACACTCAAATGCACTAGTTACTTCAACATTTGCAAGGGATTTTGCAAACAGGGGAATGCTGGCTTATGTGGAGAAGATTCAGAGAGAGGAGAGGAATAATGGGGTTGATACACTTGCTCATCAGAAATGGGCAGGGGCTAATTATTATGATAAGTATCTCAAGACCGTTCAGGGAGGAGTTACTGAAGAGCAATTCAAGCAAACATGGACTAGACCTGGAACTGTGGATATGGGTGGAGAGGGTAATGTGGTCGTTGCCAAGGCCAGAATGTAG 1815 0.4661 MAASFSAPSLIMEEEARFEAEVAEVQAWWNWERFRLTRRPYSARDVVALRGNLRQTYASNEMAKKLWRTLKTHQANGTASRTFGALDPVQVTQMAPHLDTIYVSGWQCSSTAATTNEPGPDLADYPYDTVPNKVTLIHQSYYIMSLKVKHNNNHNVHKMNKSINYDLRTFQVEHLFFAQQFHDRKQREERMRMSREERARTPYVDYLRPIIADGDTGFGGTTATVKLCKLFVECGAAGVHIEDQSSVTKKCGHMAGKVLVAISEHINRLVAARLQFDVMGVDTVLVARTDAEAATLIQSNIDTRDHQFILGVTNPSLRGKGLATLMAENMAAGKNGAELQAIEDQWLSIAKLKTFSEAVEDAIKSMNIGGEDMKRRLNEWMRYSSYEKCLSNEEGREIAERLGLRNLFWDWDLPRTREGFYRFKGSVKAAIVRGWSFAPHADLLWMETKGPNLVECTQFAEGVKSKHPEMMLGYNLSPSFNWDASGMSDEQMIEFIPRIAKLGYVWQFITVGGLHSNALVTSTFARDFANRGMLAYVEKIQREERNNGVDTLAHQKWAGANYYDKYLKTVQGGVTEEQFKQTWTRPGTVDMGGEGNVVVAKARM 604
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele31g1083 604 FunFam Isocitrate lyase 300 415 - -
Lele31g1083 604 ProSitePatterns Isocitrate lyase signature. 249 254 IPR018523 GO:0003824
Lele31g1083 604 PIRSF ICL 407 583 IPR006254 GO:0004451|GO:0019752
Lele31g1083 604 PIRSF ICL 176 365 IPR006254 GO:0004451|GO:0019752
Lele31g1083 604 PIRSF ICL 12 167 IPR006254 GO:0004451|GO:0019752
Lele31g1083 604 CDD ICL_PEPM 75 295 IPR039556 GO:0003824
Lele31g1083 604 SUPERFAMILY Phosphoenolpyruvate/pyruvate domain 11 141 IPR015813 GO:0003824
Lele31g1083 604 Pfam Isocitrate lyase family 170 575 IPR006254 GO:0004451|GO:0019752
Lele31g1083 604 Pfam Isocitrate lyase family 21 144 IPR006254 GO:0004451|GO:0019752
Lele31g1083 604 TIGRFAM isocit_lyase: isocitrate lyase 170 575 IPR006254 GO:0004451|GO:0019752
Lele31g1083 604 PANTHER ISOCITRATE LYASE/MALATE SYNTHASE 169 576 IPR006254 GO:0004451|GO:0019752
Lele31g1083 604 SUPERFAMILY Phosphoenolpyruvate/pyruvate domain 165 573 IPR015813 GO:0003824
Lele31g1083 604 Gene3D - 9 165 IPR040442 -
Lele31g1083 604 Gene3D - 166 573 IPR040442 -
Lele31g1083 604 Gene3D - 300 415 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele31g1083 Lele-ChrLele31 17639632 17641762 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele29g0462 29 2829797 2831887 Lele31g1083 31 17639632 17641762 hybridization
Lele30g0942 30 13079607 13080405 Lele31g1083 31 17639632 17641762 hybridization