Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele31g1030 ATGATTGAGTTTGCCTCGAAGGGCTTGGCGCCTGTGAGTGCAACACAGAGAGGGGACTACGACAAGTTCTTTCAGGTTAGGCGTCTTACTGGAGAAGAAGACAAAGTGCAGATGGTGGGAGCAAACGAGAAATACAAGTTGAAGAAATTAGAGAGAGCTGAAAAGCTCATGCATGTTATATTGTGGGGTGAGCTCTTCAAAGATGAATTAATCCAGAAGCAGCTTCTTTTGAAGCTCTGCAGATTGTTGCTTTACAGGGAAGAAGGAATTGTTAAATATTTTCACACTCTGGATAAGCTTATCCCTCCCAAACAACCTTTCGAGCTCAAAAGCTACTGCTTTCTCTTTGACCTTTCTCTTCCCAATCGAAACCATCATGCCGCAAGTCCTCTGACTCTGATCACACCACCTCGCTCTCTCCCATTGCTATTGTTCCCTTCAATGGCCGCTGTTACCTCTTTGTCCTTCTCCGCATTAACCCAATGTTCTGAAAGAAAGCCAGCTTTCGCCTCCACTCGCTTCCTCGGATTCAATTCGGAGGCATTACGATTTCGGACGAATATTTCTTACCACTATGCTTCTGTTGGAGCTTCCAATTCCGCTTCTAAGATGCTTATTCAATGCATGTCTTCTGCGACAGATGTTCCCACTGTATCTGAGACAAAATCTAATTTCCTCAAGGCTTATAAACGACCGATCCCTAGTATCTACAACACTGTGCTGCAGGAGCTCATTGTTCAGCAGCATTTAATGAGATACAAGAGATCTTACCGTTATGACCCTGTATTTGCTCTTGGTTTTGTCACTGTGTATGATCAACTCATGGATGGGTATCCTAGTGATGAGGATCGAGGTGCCATCTTCCAGGCATATATCAAGGCATTGAAGGAAGAGCCAGAACAATATAGAATAGATGCAAAGAGGTTGGAAGAGTGGGCCCGGGCTCAGAACCCAAATTCCCTAGTTGAGTTTTCTTCCAGAGAAGGAGAGGTTGAGGGAATATTGAAGGATATTGCAGAAAGAGCAGGTGGAAAGGGGGATTTCAGTTATAGTCGTTTCTTTGCAGTAGGCCTATTTCGACTTCTTGAGTTGGCAAATGCAACAGAACCGGCCATTTTGGACAAGCTTTGTGCAGCCTTGAACATCAACAAAAGAAGCGTTGATCGGGATTTGGATGTGTACCGTAATCTGCTTTCCAAGTTGGTTCAAGCAAAAGAATTGCTAAGGGAATATGTTGACAGGGAGAAGAAGAAAAGAGAAGAAAGGACTGAAACTCAAAAGGCTAATGAGGCCATTTCAAAATTTTTGGGACAAAGTATCAACTTTCCGGCCTTTAGACATTAA 1344 0.436 MIEFASKGLAPVSATQRGDYDKFFQVRRLTGEEDKVQMVGANEKYKLKKLERAEKLMHVILWGELFKDELIQKQLLLKLCRLLLYREEGIVKYFHTLDKLIPPKQPFELKSYCFLFDLSLPNRNHHAASPLTLITPPRSLPLLLFPSMAAVTSLSFSALTQCSERKPAFASTRFLGFNSEALRFRTNISYHYASVGASNSASKMLIQCMSSATDVPTVSETKSNFLKAYKRPIPSIYNTVLQELIVQQHLMRYKRSYRYDPVFALGFVTVYDQLMDGYPSDEDRGAIFQAYIKALKEEPEQYRIDAKRLEEWARAQNPNSLVEFSSREGEVEGILKDIAERAGGKGDFSYSRFFAVGLFRLLELANATEPAILDKLCAALNINKRSVDRDLDVYRNLLSKLVQAKELLREYVDREKKKREERTETQKANEAISKFLGQSINFPAFRH 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele31g1030 447 PANTHER PROTEIN THYLAKOID FORMATION 1, CHLOROPLASTIC 148 440 IPR017499 GO:0010207|GO:0015979
Lele31g1030 447 Hamap Protein Thf1 [thf1]. 212 420 IPR017499 GO:0010207|GO:0015979
Lele31g1030 447 TIGRFAM PS_II_psb29: photosystem II biogenesis protein Psp29 214 419 IPR017499 GO:0010207|GO:0015979
Lele31g1030 447 Coils Coil 394 424 - -
Lele31g1030 447 Pfam Thylakoid formation protein 217 422 IPR017499 GO:0010207|GO:0015979
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele31g1030 Lele-ChrLele31 17278403 17283504 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele29g0514 29 3114178 3118165 Lele31g1030 31 17278403 17283504 hybridization
Lele30g0899 30 12827768 12830395 Lele31g1030 31 17278403 17283504 hybridization