Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele31g1029 ATGGCACTGGCAAGCGAAAAAATGGGGTCTGATGCGAAGGTTTGGAATCTCTGTAGAATGCCGTTTTGGCAAACGAGCCATGCTGCTTCTTCATCTGCTTCCACCATTTCTTCTATGCATTATGCTCACCAGCAACAGAACATTAATATTCAATCTGGTGATAGATCGACTCCACATCAATCTTCCAGTTCGGTTTCCTCCATGGCCAAGTCTCTGCTTCCTACAAGGAAGAGGCTACGTCTTGATCCTCCCAACAAGCTCTTCTTCCCTTATGAACCGGGAAAGCAAGTTAGGAGCGCTATCGAAATAAAAAACACTAGCAAATCTCGTGTGGCTTTCAAGTTTCAAACAACTGCACCCAAGAGTTGTTTTATGCGCCCACCGGGTGGTATTCTTGCACCAGATGAAAGCATAATTGCCACTGTGTTCAAGTTTGTTGAGCCACCCGAGAACAACGAGAAGCCAATTGATCAAAAGAGCAAGGTTAAGTTTAAAATTATGAGCTTAAAAGTGAAAGGCGAAATGGACTATGTACCAGAACTGTTTGACGAACAAAGGGATCAAGTTGCAGTAGAGCAAATTTTGCGGGTTGTGTTTTTGGATCCTGAGCATCCTAGCCCTGCCATGGATAAACTTAAGCGACAGTTAGCCGAGGCTGAGTCTTCATTGGAGGCACGGAAGAAGCCGCCTGAGGAGACAGGTCCACGAATAGTTGCAGAAGGGAAAGATAGAAGAGAAAAATACCTAGCTCGGCAGCAGGTTCAAGGGGTCGATTCAGCGTAA 783 0.4547 MALASEKMGSDAKVWNLCRMPFWQTSHAASSSASTISSMHYAHQQQNINIQSGDRSTPHQSSSSVSSMAKSLLPTRKRLRLDPPNKLFFPYEPGKQVRSAIEIKNTSKSRVAFKFQTTAPKSCFMRPPGGILAPDESIIATVFKFVEPPENNEKPIDQKSKVKFKIMSLKVKGEMDYVPELFDEQRDQVAVEQILRVVFLDPEHPSPAMDKLKRQLAEAESSLEARKKPPEETGPRIVAEGKDRREKYLARQQVQGVDSA 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele31g1029 260 ProSiteProfiles Major sperm protein (MSP) domain profile. 78 200 IPR000535 -
Lele31g1029 260 Gene3D Immunoglobulins 74 204 IPR013783 -
Lele31g1029 260 PANTHER VESICLE-ASSOCIATED MEMBRANE PROTEIN-ASSOCIATED PROTEIN 77 232 IPR016763 GO:0005789
Lele31g1029 260 MobiDBLite consensus disorder prediction 51 71 - -
Lele31g1029 260 MobiDBLite consensus disorder prediction 214 251 - -
Lele31g1029 260 MobiDBLite consensus disorder prediction 214 260 - -
Lele31g1029 260 Pfam MSP (Major sperm protein) domain 79 189 IPR000535 -
Lele31g1029 260 SUPERFAMILY PapD-like 67 208 IPR008962 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele31g1029 Lele-ChrLele31 17268088 17270177 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele29g0516 29 3134020 3135938 Lele31g1029 31 17268088 17270177 hybridization
Lele30g0894 30 12809738 12811777 Lele31g1029 31 17268088 17270177 hybridization