Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele30g0894 ATGGCATCGGAAAGCGAGAAAATGGGGTCTGATGGGAAGGTTTGGAATATCTGTAGAATGCCGTTTTGGCAAAAGAGCCATGCTTCTTCTGCTTCCTCTACTTCTTCTATGCATTATGCTCATCATCAACAAAACATAAATATTCAGTCTGCTGATAGATCGACTCAACATCAATCTTCCAGTACGGTTTCCTCCATGGCCAAGTCTCTGCTTCCTACAAGGAAGAGGCTACGTCTTGATCCTCCCAACAAGCTCTACTTCCCCTATGAACCGGGAAAGCAAGTTAGGAGCGCCATCGAAATAAAAAACACTAGCAAATCTCGTGTGGCTTTCAAGTTTCAAACAACTGCACCGAAGAGTTGTTTTATGCGCCCACCGGGTGGTATTCTTGCACCTGATGAAAGCATAATTGCCACTGTATTCAAGTTTGTTGAGCCACCTGAGAACAACGAGAAGCCAATTGATCAAAAGAGCAAGGTTAAGTTCAAAATTATGAGCTTAAAAGTGAAAGGCGAAATGGACTATGTACCAGAACTGTTTGACGAACAAAGGGATCAAGTTGCAGTAGAGCAAATTCTGCGGGTTGTATTTTTGGATCCTGAACGTCCTAGCCCGGCCATGGATAAACTTAAGCGACAATTAGCTGAGGCTGAGGCTGCATTGGAGGCGCGAAAGAAGCCGCCTGAGGAGACAGGTCCACGAATAGTTGCAGAAGGAGTAATAGATGAATGGAAAGATAGAAGAGAAAAATACCTAGCTCGGCAGCAGGTTCAAGGGGTCGATTCAGTGTAA 792 0.4457 MASESEKMGSDGKVWNICRMPFWQKSHASSASSTSSMHYAHHQQNINIQSADRSTQHQSSSTVSSMAKSLLPTRKRLRLDPPNKLYFPYEPGKQVRSAIEIKNTSKSRVAFKFQTTAPKSCFMRPPGGILAPDESIIATVFKFVEPPENNEKPIDQKSKVKFKIMSLKVKGEMDYVPELFDEQRDQVAVEQILRVVFLDPERPSPAMDKLKRQLAEAEAALEARKKPPEETGPRIVAEGVIDEWKDRREKYLARQQVQGVDSV 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele30g0894 263 Pfam MSP (Major sperm protein) domain 77 187 IPR000535 -
Lele30g0894 263 SUPERFAMILY PapD-like 65 206 IPR008962 -
Lele30g0894 263 PANTHER VESICLE-ASSOCIATED MEMBRANE PROTEIN-ASSOCIATED PROTEIN 75 246 IPR016763 GO:0005789
Lele30g0894 263 Gene3D Immunoglobulins 72 202 IPR013783 -
Lele30g0894 263 ProSiteProfiles Major sperm protein (MSP) domain profile. 76 198 IPR000535 -
Lele30g0894 263 MobiDBLite consensus disorder prediction 49 69 - -
Lele30g0894 263 MobiDBLite consensus disorder prediction 49 74 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele30g0894 Lele-ChrLele30 12809738 12811777 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele30g0894 30 12809738 12811777 Lele31g1029 31 17268088 17270177 hybridization
Lele30g0894 30 12809738 12811777 Lele32g0494 32 3095483 3097518 hybridization