Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele29g0516 ATGGGGTCTGATGCGAAGGTTTGGAATCTCTGTAGAATGCCGTTTTGGCAAACGAGCCATGCTGCTTCTTCTTCTGCTTCCTCCATTTCTTCTATGCATTATGCTCACCAGCAACCGAACATCAATATTCAATCTGGTGATAGATCGATTCCACATCAATCTTCCAGCTCGGTTTCCTCCATGGCCAAGTCTCTGCTTCCTACAAGGAAGAGGTTACGTCTTGATCCTCCCAACAAGCTCTTCTTCCCCTATGAACCGGGAAAGCAAGTTAGGAGCGCTATCGAAATAAAAAACACTAGCAAATCTCATGTGGCTTTCAAGGTGAGGAGCATGTTTCTAGTTGCTGTTGTTGTTTGTTCTTATTTTCTTGTTTTAAGAATTGATATTTCAGAAATAAGTTGTTTTATGCGCCCACCCGGTGGTATTCTTGCACCAGATGAAAGCATAATTGCCACTGTGTTCAAGTTTGTTGAGCCACCCGAGAACAGCGAGAAGCCAATTGATCAAAAGAGCAAGGTTAAGTTTAAAATTATGAGCTTAAAAGTGAAAGGCGAAATGGACTATGTACCAGAACTGTTTGACGAACAAAGGGATCAAGTTGCAGTAGAGCAAATTTTGCGGGTTGTGTTTTTGGATCCTGGACATCCTAGCCCTGCCATGGATAAACTTAAGCGACAGTTAGCTGAGGCTGAGTCTGCATTGGAGGCACGGAAGAAGCCGCCTGAGGAGACAGGTCCACGAATAGTTACAGAAGGAGTAATAGATGAATGGGTTGGTTTCTTTCTTTATGTTCTCCCTTTTTAG 804 0.4328 MGSDAKVWNLCRMPFWQTSHAASSSASSISSMHYAHQQPNINIQSGDRSIPHQSSSSVSSMAKSLLPTRKRLRLDPPNKLFFPYEPGKQVRSAIEIKNTSKSHVAFKVRSMFLVAVVVCSYFLVLRIDISEISCFMRPPGGILAPDESIIATVFKFVEPPENSEKPIDQKSKVKFKIMSLKVKGEMDYVPELFDEQRDQVAVEQILRVVFLDPGHPSPAMDKLKRQLAEAESALEARKKPPEETGPRIVTEGVIDEWVGFFLYVLPF 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele29g0516 267 Pfam MSP (Major sperm protein) domain 72 110 IPR000535 -
Lele29g0516 267 Pfam MSP (Major sperm protein) domain 133 200 IPR000535 -
Lele29g0516 267 SUPERFAMILY PapD-like 70 211 IPR008962 -
Lele29g0516 267 ProSiteProfiles Major sperm protein (MSP) domain profile. 71 211 IPR000535 -
Lele29g0516 267 Gene3D Immunoglobulins 67 214 IPR013783 -
Lele29g0516 267 PANTHER VESICLE-ASSOCIATED MEMBRANE PROTEIN-ASSOCIATED PROTEIN 71 226 IPR016763 GO:0005789
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele29g0516 Lele-ChrLele29 3134020 3135938 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele29g0516 29 3134020 3135938 Lele31g1029 31 17268088 17270177 hybridization
Lele29g0516 29 3134020 3135938 Lele32g0494 32 3095483 3097518 hybridization