Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele31g1021 ATGCAAATTCTCATCCGGGAAGCTATTCTTGGGGCGCTTAGTTCTTCTAACGTTGGAGAGCAATCAACGTTTGACATTATTTCTTTCGCAAGATCAGAGGATTCAAGTGGGTATTTTGTGGAATCGGATTTGGAAAGATGGTCGAGTGCAAATAATAAGGTTCGAAAAATGGAGGCGGCACCTAGGTTTGCTTATCTTATTTCAGGCACAAAAGGTGATAGTCATAGGATGATGAGGACTTTAGAAGCAGTATATCACCCAAGAAATCAGTATGTTCTGCATTTGGATCTTGAGGCTCCACCACGCGAGAGATTGGAATTGGCAGCTTCAGTGAAAGCTGATCCTACATTTCGTGAAGTGGAGAATGTTCGTGTTATGTCTCAATCCAATCTGGTGACTTATAAAGGTCCTACTATGATTGCTTGCACCCTTCAAGCTATTGCAATATTGTTGAAAGAGAGCTCTGAATGGGACTGTGATTTAGAAATAAGAAAGTTTATTGGACTTCATCCATATCCTGATTTTTGTGGAAGATGGATCTCTATATATCTTTCAGTAGTAAAATGCTTTTGTAGTTTCCTTCAAAAAGGGGGAAAGCACTTGCCTATATCTGAGAACGCAATTTCTTTTCATTTTCTTGTTACATGGAATGATTTGCTTCATATTTTTTCTAATCTGTCTAGAGGGATCAATTTCATCGAACATACCCACATTGCCGGTTGGAAACTCAACCATAGAGCCAGACCCATCATCATCGATCCAGCCCTTTACTTATCGAAGAAATCCGATATCGCATGGACGACTCAGCTACGAACACTTCCCACCTCTTTTAAGTTATTTACAGGTTCGGCTTGGGTTGTGCTGACGCGGTCTTTTGTCGAATACTGCATATGGGGATGGGATAACCTTCCAAGAACAATTCTGATGTATTATACAAATTTCATCTCATCTCCAGAGGGCTATTTTCACACTGTCATTTGTAACACTGAGGAATTCAAACATACAGCTATTAGCCATGATCTTCACTACATAGCGTGGGACACGCCGCCAAAGCAGCACCCGAGATCTTTGACTATGAAGGACTTTGACAAAATGGTTCAGAGCAAGGCTCCGTTTGCACGGAAGTTTGCAAAGGACGATCCGGTCCTGGACAAGATCGACAAAGAGCTTTTGGGACGCACGCATAGATTTTCTCCTGGAGCATGGTGTATTGGCAACTCGACGGAAGGTGCCGCCGATCCTTGTTCTTTTCATGGCAATGATACCGTGTTCAGGCCAGGCCCTGGTGCTGAGAGGTTGCTTGAATTGTTTCAAACTCTGTTATCTGATGATTTCAAAAGCAAGCAGTGTTCTTGA 1356 0.4233 MQILIREAILGALSSSNVGEQSTFDIISFARSEDSSGYFVESDLERWSSANNKVRKMEAAPRFAYLISGTKGDSHRMMRTLEAVYHPRNQYVLHLDLEAPPRERLELAASVKADPTFREVENVRVMSQSNLVTYKGPTMIACTLQAIAILLKESSEWDCDLEIRKFIGLHPYPDFCGRWISIYLSVVKCFCSFLQKGGKHLPISENAISFHFLVTWNDLLHIFSNLSRGINFIEHTHIAGWKLNHRARPIIIDPALYLSKKSDIAWTTQLRTLPTSFKLFTGSAWVVLTRSFVEYCIWGWDNLPRTILMYYTNFISSPEGYFHTVICNTEEFKHTAISHDLHYIAWDTPPKQHPRSLTMKDFDKMVQSKAPFARKFAKDDPVLDKIDKELLGRTHRFSPGAWCIGNSTEGAADPCSFHGNDTVFRPGPGAERLLELFQTLLSDDFKSKQCS 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele31g1021 451 Pfam Core-2/I-Branching enzyme 63 158 IPR003406 GO:0016020|GO:0016757
Lele31g1021 451 Pfam Core-2/I-Branching enzyme 213 365 IPR003406 GO:0016020|GO:0016757
Lele31g1021 451 PANTHER GLYCOSYLTRANSFERASE 213 450 IPR044610 GO:0015020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele31g1021 Lele-ChrLele31 17229889 17233107 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele31g1021 61 451 Glycosyltransferase AT1G03520 68.798 0.0 563
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele29g0524 29 3171899 3175990 Lele31g1021 31 17229889 17233107 hybridization
Lele30g0889 30 12767712 12773376 Lele31g1021 31 17229889 17233107 hybridization