Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele31g1018 ATGAGTCGCTACGATTCGAATCCTTTCGAAGAAGAAGAGGTTAATCCCTTCGCGGATGGATCAGGTAAAGGAAAAGGGCAATCAACCTATGGTGGAGGTGCATTTTATATGACTAACTCCGCAACTGTCCCTTCTGCAACATCTAAGCTCTCACCCCTTCCTCCTGAGCGTTATGATCGTGGGGCAACTATTGATATTCCTCTAGATTCCTCAAAGGATGTAAAAGCAAGAGAGAAGGAGCTCCAAGCTAAAGAGGCTGAATTGAAAAGAAGGGAACAGGAACTAAAACGAAGGGAAGATGCTATAGCCCGAGCCGGTATAGTTATAGAGGAGAAAAATTGGCCACCATTTTTCCCTATCATTCATCATGACATTGGAAAGGAAATACCAATACATCTGCAGAAGGTTCAGTATGTTGCATTCACAACATTTTTAGGTTTGATTCTGTGCCTTACATGGAATATTGTGGCAGTTACTACTGCTTGGATCAAAGGGGAAGGTCCTACAATATGGTTTCTTGCTATTATCTACTTTATTTCAGGTGTACCTGGAGGCTACGTGTTGTGGTATCGCCCTCTTTATCGGGCTATGAGGACTGACAGTGCTCTGAAGTTTGGCTGGTTTTTCTTGTTTTACGTGTTGCACATTGGCTTTTGCATATTCGCTTCAGTTGCTCCACCAATTATCTTCAGAGGAAAATCTCTCACAGGTATCTTGCCTGCTATAGATTTGCTGGGTGACCACGCACTGGTTGGGATATTCTACTTTATTGGGTTTGCGTTCTTCTGCCTTGAGTCTCTGCTGAGCGTCTGGGTTATTCAGCAAGTATATATGTACTTCCGTGGCAGCGGCAAGGCTGCAGAGATGAAGCAACAAGCCGCGAGGAGCACCATGATGGCAGCTCTATGA 909 0.4444 MSRYDSNPFEEEEVNPFADGSGKGKGQSTYGGGAFYMTNSATVPSATSKLSPLPPERYDRGATIDIPLDSSKDVKAREKELQAKEAELKRREQELKRREDAIARAGIVIEEKNWPPFFPIIHHDIGKEIPIHLQKVQYVAFTTFLGLILCLTWNIVAVTTAWIKGEGPTIWFLAIIYFISGVPGGYVLWYRPLYRAMRTDSALKFGWFFLFYVLHIGFCIFASVAPPIIFRGKSLTGILPAIDLLGDHALVGIFYFIGFAFFCLESLLSVWVIQQVYMYFRGSGKAAEMKQQAARSTMMAAL 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele31g1018 302 PANTHER SECRETORY CARRIER-ASSOCIATED MEMBRANE PROTEIN SCAMP 4 299 IPR007273 GO:0015031|GO:0016020
Lele31g1018 302 Pfam SCAMP family 111 282 IPR007273 GO:0015031|GO:0016020
Lele31g1018 302 Coils Coil 71 101 - -
Lele31g1018 302 MobiDBLite consensus disorder prediction 1 34 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele31g1018 Lele-ChrLele31 17203358 17208069 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele31g1018 64 302 Miscellaneous Gene Families AT2G20840 82.845 8.88e-144 402
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele29g0528 29 3195136 3199820 Lele31g1018 31 17203358 17208069 hybridization
Lele30g0884 30 12741226 12745819 Lele31g1018 31 17203358 17208069 hybridization