Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele31g0983 ATGGTGACGTTTTTGACATGGCGTGGTCGTTTTGCTGCAGCTATAGGGATTAGGCAAAATGTTGAGCGAAGCCAGCTAAGAACTAGTGAGCCACCGACAAGGCTAGGTTCCAAGTGCAATTCAAGCGATGAGAGATCTAAGTACCCAAATCAGAGCAAAAAGGGTATCTGGGAATCTCTCCAATCTCCTAAATCTCGCTGTTCTTCGCCGTCGTTTATATACAGAAGGATGGCGGCCGGAAATGGTCTGTTTTACCCTATTCTTGGTTTTGTTTCCTGTGTGGTTTTCATATACATGTCTTTTGGAGACTTGAGGCCGAGATTAAGGGAAGAACGGTCATTGTCATTTGTGAAGAGAAATGGGACTCAGTTAATGTTAGATGGCAGACCTTTCTACATCAATGGTTGGAACTCTTACTGGTTTATGGTTCATTCTGTGGACGAATCTTCCAGACCCAGAGTTCGTGCGATGCTTCAATCTGGTGCCAAGATGGGTCTCACTGTTTGTAGAACTTGGGCTTTTAATGATGGCGACTACAATGCCCTTCAGATTTCCCCTGGTCGCTTCGATGAGCGAGTTTTTCAGGCCTTGGATTATGTCATAGCTGAAGCAAGGCAAACTGGAATTCGGCTTCTCCTCGCCTTGGTCAATAACTTGCATGCCTATGGTGGGAAGACTCAGTATGTCAAATGGGCATGGGAAGAAGGGATAGGGTTAAGCTCATCCAATGATTCTTTCTTTTATGATCCTTCAATCCGCAGTTATTTCAAGAATTATGTCAAGACTGTTCTGACAAGGAAGAATACTATCACTGGAGTTGAATATAGAAATGACCCCACCATATTAGGCTGGGAATTAATTAATGAACCTCGTTGCATGACTGATCCTTCAGGCGACACTCTCCAAGACTGGCTTGAAGAAATGTCTGCTTTTGTCAAATTGATAGACAAGAACCATTTGGTGACTATTGGCCTTGAAGGATTTTATGGTCCTAATGACCCTAAAGGCCCTTCTGTCAACCCAGAGGAGTGGGCTGCCAGACTCGGATCTGATTTTATTCGCAATTCTGGGATTGCGAATATCGATTTCACCGCTGTTCATATCTATCCTGACCATTGGTTAAAAACGCATGACTTTGAAGTGAACCTGAATTTTGTCACCAAGTGGATGCATTCGCACATTGAAGATGGCGACAAAGAATTGAAGAAGCCTGTTCTGTTCTCTGAATATGGGTGGTCAGACCTGATCAAGAACTTTTCGGTATCTGACCGTGAAAGGATGTACAGAACAATTTTGGATATAATCTACAAATCTGCTAAAAAAAACCGGTCGGGCTCTGGTGCCTTGGTGTGGCAATTCTTAGTAGAAGGAATGAACGAGTTTGAGGATGATTTCTGGATGATCCCATATAAAGGATCATCAACTTATTCTCTATTCCTTGAACAATCATGCAGATTGGGCAAAGTCACAGGATGGACTCAACATGACACAAGTTTCAAAGAGGCATGTAAGAAAATTTGA 1521 0.43 MVTFLTWRGRFAAAIGIRQNVERSQLRTSEPPTRLGSKCNSSDERSKYPNQSKKGIWESLQSPKSRCSSPSFIYRRMAAGNGLFYPILGFVSCVVFIYMSFGDLRPRLREERSLSFVKRNGTQLMLDGRPFYINGWNSYWFMVHSVDESSRPRVRAMLQSGAKMGLTVCRTWAFNDGDYNALQISPGRFDERVFQALDYVIAEARQTGIRLLLALVNNLHAYGGKTQYVKWAWEEGIGLSSSNDSFFYDPSIRSYFKNYVKTVLTRKNTITGVEYRNDPTILGWELINEPRCMTDPSGDTLQDWLEEMSAFVKLIDKNHLVTIGLEGFYGPNDPKGPSVNPEEWAARLGSDFIRNSGIANIDFTAVHIYPDHWLKTHDFEVNLNFVTKWMHSHIEDGDKELKKPVLFSEYGWSDLIKNFSVSDRERMYRTILDIIYKSAKKNRSGSGALVWQFLVEGMNEFEDDFWMIPYKGSSTYSLFLEQSCRLGKVTGWTQHDTSFKEACKKI 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele31g0983 506 MobiDBLite consensus disorder prediction 25 52 - -
Lele31g0983 506 Gene3D Glycosidases 114 490 - -
Lele31g0983 506 Pfam Cellulase (glycosyl hydrolase family 5) 130 451 IPR001547 GO:0004553|GO:0071704
Lele31g0983 506 ProSitePatterns Glycosyl hydrolases family 5 signature. 282 291 IPR018087 GO:0004553|GO:0005975
Lele31g0983 506 SUPERFAMILY (Trans)glycosidases 115 480 IPR017853 -
Lele31g0983 506 FunFam Mannan endo-1,4-beta-mannosidase 6 113 490 - -
Lele31g0983 506 PANTHER - 85 496 IPR045053 GO:0004553
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele31g0983 Lele-ChrLele31 16997484 17005124 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele31g0983 77 503 Glycoside Hydrolase AT2G20680 68.065 0.0 626
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele29g0560 29 3389943 3393599 Lele31g0983 31 16997484 17005124 hybridization
Lele30g0849 30 12556689 12560607 Lele31g0983 31 16997484 17005124 hybridization