Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele31g0904 ATGGCTTTGGTTGATATAACCAAATCCTGCATCGATTCAATCAGACAGATACAAGAGCATATTGAAGGTGCTATTGTTTACTTAGATGCTGGGTGTACAGAGAGTTTCCAGTTTATTGGTGCATATCCTGTGCTTCTGGATGTTGGTGCCAGAGCTATCTGCAGTTTAGAAAACATGTGTTCACTTGATGCGGTGGTTGATTGGAACTCATTTTCTAATCCTGCGAGGAAACTTGTCGTAATCACATCATGTTTACTAAGTGATGCACATCGGTATATTTTACGATGCCTGAGCACACATCGAGTTGTCCGTCATTGTATTATATTTACATCAATCTCAGAGACAGCTCATTCAACATTTCCTGATTCACCTCTGGGACCAGATGCATATCAAGAATATGAAGCCTTGCTGGTTCAAGATTATGAAGAACTAGTTAAGAAATCTGGGACAAATTCTCGTGGAAAGCTTGAAGAAGAAGGACGTTCACCCTCTCCTTCCAGTGGAAAGGACGCTCTTCATCTTGAAGCTAGTTCAAGGGCAAATTTATGTGAAGATAATCCATTAGACTACAATGAAGATGCAGGGCCCAGATTGGTTGTTTCGGTTAATCATTTTCCTTTGATTTTATGCCCCCTTTCACCAAGAGTATTTGTTTTACCTTCAGAAGGGTTGATAGCTGAAGCATACTTATCAGCCGAACATGAAGATTCCATCAGTCCTGGATTGCCTCCCATAAGTACTGGAGTGCTCTCTGATGCTGATGATGTCCCTCCAGGGGCAACTCTTACTGCACACTTTCTCTACCACTTGGCATCAAAGATGGACTTGAAAATGGAAATTTTCTCCCTTGGTGATATGTCAAAAGTAGTTGGGAAGATTCTGACAGACATGTCAAGTCTGTATGATGTAGGTCGCCGTAAACGATCAGCAGGGCTTTTACTCATTGATCGCACACTTGATCTTCTTACTCCTTGCTGCCATGGGGACTCATTGGTTGATTGTATGTTTTCATGTCTGCCCCGTAGGAGTAGAACAACTTCACACCCCCAAGTTAAGAGTTCAGGAACCCAACTCAAACATGGAACTTCCTACCTGCAACGTGCTCCCTTAGATGTCCAGATACCACTTGGGAAGATCTTCAATGAAGAAGATTGCGAAATGGATAATTTTTGTCTACTAGCAAGTGTTGAAGCTTTTCTTTGTGGTTGGAATTCTAGCTCCTCTGATTCTCAGATGTCTGATTTAATTAGTTTTAGTCAGAGAATTCGTGAGAAGTCTCTAAATTCTGATGGAGACATGCTTACTGGGTCCTTAATCTCCTCTGAAAATTTCCGTGGAACACCGTTCTTGGAATCTTTACTAGATAGAAGAACAAGAGATGGAGCCCTACTTGTAAAGAAATGGTTACAGGAAAATCTGCGCAGGGATAATGTAACTTTGAATGTGAAATCTCGTCCTGGTCATGTTACAAGACAGGAGTTGCAAGCTATGATCAAAGCATTGGGCAGGAGCCAATCATCTTTAGTGAGAAACAAAGGAATTATTAAATTAGCTTCTGCCACCCTATTAACCCTTGAGGAATCAACTTCCGCCAAATGGGATGCATTTAGCAGTGCGGAGAAGATTCTAAGTGTAAGTTCTGGAGAAACCAGTCAAAGTCTTGCTGCTCAAATTGGTGATCTCATTAATAAGAGTGCTTTATTGGGATCACATGGAAATCAAGTGAAAAAGGAGCTCTCACAAGGGGTACTTTCGTTGGAAGATGCTTTGTTGTTGATGATTGTTGGATATATATTGGCTGGGGAGAATTTCCCAACATCGGGGTCTGATGGCCCATTCTCCTGGCAAGAGGAACATATGTTAAAAGAGGCAGTTGTAGATGCCATTCTAGAAAATCCATTAGTAGCCAAACTCAAGCTTCTAGATGGATTAAGGGAAGAGCTTGAAGCTAATCTAAGTAATTCAAAATCAGAAGAAACAACCAAAGAATCTCCAAAGCTAGACATTGATGATTTTGATGATGATCAATGGGGGAAATGGGGCGATGAAGAAGCTGATGATGATAATAAAAATGAGCAAGTGTATGATGACATGCAGCTGAAGTTGGAGTTGCGGGATAGGGTGGATCACCTTTTTAAATTCCTTCATAAGTTGTCCGATTTGAAAAGAAAAAACATACCAACGAGGGATGGATCATTGACCATGGAAACTAATTTTGGCGATGAGGCTTCCATGGGAAAAGGATTACTCTATAAGCTGCTAACAAGGGTGTTGGGCAAGTTTGATGTGCCAGGGTTAGAATACCATTCTTCCACTGTGGGGCGGCTTTTTAAGAGTGGATTTGGAAGATTTGGCCTTGGTCAGGCAAAGCCCAGTCTTGCTGATCAAAATGTCATTTTGGTGTTCGTGATTGGGGGAATCAATGGAGTTGAGGTGCGTGAAGCTCATGAAGCCTTGTCTGAAAGCGGAAGACCTGATATTGAATTGCTTGTTGGCGGAACAACTCTACTCACTCCCGATGACATGCTTGATTTACTATTGGGGGAGTACAGTTACGTTAGATCCTTTCAGCAATGGAAAGTAGAGAGAGAAATCTGA 2598 0.4165 MALVDITKSCIDSIRQIQEHIEGAIVYLDAGCTESFQFIGAYPVLLDVGARAICSLENMCSLDAVVDWNSFSNPARKLVVITSCLLSDAHRYILRCLSTHRVVRHCIIFTSISETAHSTFPDSPLGPDAYQEYEALLVQDYEELVKKSGTNSRGKLEEEGRSPSPSSGKDALHLEASSRANLCEDNPLDYNEDAGPRLVVSVNHFPLILCPLSPRVFVLPSEGLIAEAYLSAEHEDSISPGLPPISTGVLSDADDVPPGATLTAHFLYHLASKMDLKMEIFSLGDMSKVVGKILTDMSSLYDVGRRKRSAGLLLIDRTLDLLTPCCHGDSLVDCMFSCLPRRSRTTSHPQVKSSGTQLKHGTSYLQRAPLDVQIPLGKIFNEEDCEMDNFCLLASVEAFLCGWNSSSSDSQMSDLISFSQRIREKSLNSDGDMLTGSLISSENFRGTPFLESLLDRRTRDGALLVKKWLQENLRRDNVTLNVKSRPGHVTRQELQAMIKALGRSQSSLVRNKGIIKLASATLLTLEESTSAKWDAFSSAEKILSVSSGETSQSLAAQIGDLINKSALLGSHGNQVKKELSQGVLSLEDALLLMIVGYILAGENFPTSGSDGPFSWQEEHMLKEAVVDAILENPLVAKLKLLDGLREELEANLSNSKSEETTKESPKLDIDDFDDDQWGKWGDEEADDDNKNEQVYDDMQLKLELRDRVDHLFKFLHKLSDLKRKNIPTRDGSLTMETNFGDEASMGKGLLYKLLTRVLGKFDVPGLEYHSSTVGRLFKSGFGRFGLGQAKPSLADQNVILVFVIGGINGVEVREAHEALSESGRPDIELLVGGTTLLTPDDMLDLLLGEYSYVRSFQQWKVEREI 865
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele31g0904 865 MobiDBLite consensus disorder prediction 148 164 - -
Lele31g0904 865 Gene3D - 713 847 IPR027482 -
Lele31g0904 865 PANTHER VESICLE PROTEIN SORTING-ASSOCIATED 14 846 IPR001619 GO:0016192
Lele31g0904 865 SUPERFAMILY Sec1/munc18-like (SM) proteins 198 328 IPR036045 -
Lele31g0904 865 MobiDBLite consensus disorder prediction 148 171 - -
Lele31g0904 865 SUPERFAMILY Sec1/munc18-like (SM) proteins 774 847 IPR036045 -
Lele31g0904 865 Coils Coil 638 658 - -
Lele31g0904 865 Pfam Sec1 family 483 844 IPR001619 GO:0016192
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele31g0904 Lele-ChrLele31 16452907 16458402 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele29g0636 29 3933004 3938367 Lele31g0904 31 16452907 16458402 hybridization
Lele30g0761 30 11986164 11990863 Lele31g0904 31 16452907 16458402 hybridization