Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele31g0873 ATGGAGTCGATATTGGCGAGAGCGTTGGAGTACACTCTCAAGTACTGGCTCAAATCCTTCTCTAGAGATCAATTCAAGTTGCAGGGTCGGACGGTGCAGCTCTCGAATCTAGATTTAAACGGGGATGCTTTGCATTCAAGTGTTGGATTGCCACCTGCTCTGAATGTTGCGATGGCGAAAGTGGGGAAATTGGAAATCATACTTCCTTCGGTGAGCAATGTACAAATAGAACCCATCATTGTGCAAATTGATCGTCTTGATTTGGTTCTCGAGGAGAATACTAATTTCGACGCATCTGCAAGTCCAAAGGGTACCGCGCCATCCACTGCCTCTGCCTCCACAAAGGGTAGCGGATATGGTTTTGCTGATAAGATTGCAGATGGAATGACTATACAGATTCATACAGTGAACTTGTTACTGGAAACTCGTGGAGGTGCTTGCCGCCAAGGGGGATCAACTTGGGCACCGCCTATGGCATCTATCACCATATGCAATCTTTTGCTCTATACCACAAATGAAGAATGGCAGATTACGATTCAGAGAGCTGAATTAAACAGTCCACTTGGGCTTGAGGTTCAGTTACACGTTACTGAAGCTGTGTGCCCTGCATTAAGTGAACCAGGATTGCGTGCTCTTCTCCGCTTTATGACGGGTATATATGTCTGCCTAAACAGAGGAGATGTTGATTTTAAGGCTCAACAGCGGTCTACAGAAGCAGCTGGGCGCTCTCTTGTCTCTATTGCTAGCATTTCTGACGACGACGACTCTAACTTAACAAGGATTACAATTTCTGGACTATTTCTGAGGGATACCTTCTCTCGCCATCCATGTACCTTGGTGCAACCATCAATGCACGCTATGGCAGGAGAAGCTTTCGATGTTCCAGAATTTGCTAGGAGCTTTTGTCCTCCTATATACCCATTAGGTGAACAGAAGTGGCAACTGATTGAGGGTACCCCTCTAATATGCCTCCATTCCCTACAGATCAAGCCTTCTCCCCTTCCACCAGCCTTTGCTTCTCAAACTGTTATCGACTGTCAGCCTTTGATGATTCATCTCCAAGAAGAATCCTGCTTGAGGATTTTTTCTTTCTTAGCTGATGGCATTGTTGTCAATCCTGGTGATGTTTTGCCAGATTTCTCAGTAAATTCTCTCATTTTCACACTTAAGGGACTAGATCTTACAATTCCTTTGGACGAGACCCAAATAAATACTCCTGAAAGCAACATAGACAGCGCAGTCCAGAGCTTTTCTGGAGCAAGGCTTCATATTGAAAGCCTTTTGTTTTCAGATTCACCCTCTTTGAAACTAAGAATGCTGAACCTGGAGAAGGATCCTGCTTGTTTCTGTCTTTGGGAAGGTCAACCAATTGATGCTAGCATTAAGAAGTGGACTGCTAGAGCATCACATCTTTCTTTGTCTCTAGAAACATGTAAAGGAGAAACTGGGCCTCAGAATTCTCTTGGACAGAGTGCAGGATTATGGACATGTGTTGAACTGAAAGATGCTTGCGTTGAAGCGGCTATGGCAATGGCTGATGGCAGTCTATTATTAGAAGTCCCTCCACCTGGGGGTATTGTAAGGGTTGGAGTTGCATGTGAACAATTTTTATCCAACACTTCTGTTGAACAGTTATATTTTGTTCTTGATCTCTATTCTTATTTTGGGAGAGTTGGTGAGAAAATAGCAAAAGCTGGAAAAAGTAAACGACTGATAGATTTTAGGGAGAAATCTTCAAGTAGACAGCTTATGGACAAATCTTCTAGTATAAAGTTTATGGACAAGGTTCCTAGTGACACTGCTGTAAGTTTAGCAGTGAAAGACCTCCAACTTCGATTTCTGGAATTTTCTTTAATGAATGTTGAGGAAATGCCTCTAGTGCAGTTTATTGGAGATGATCTGTTTATTACTGCCACTCATAGAACCCTTGGTGGTGCCGTTGTTGTTTCATCCGCTTTACGTTGGCAGAGTGTTGAGATAGATTGTGTGGATGCTGAGGCGCACCTGGCACTTGAAAATGGCTCAATTTTGAATTATGTTGGAAGTATTCCCTCAATTAGTAGTAATGGATATCCTCAATTAAGAGCTGTATTTTGGATTAATAACAAAAGAAACAATCTGTCAAATGGAAATGCTCTCTCATTTCCTTTTCTGGATATGCGCATGGAGCATGTCATTCCATTAAATGAACAAGACATCGAGTCACATAGTTTGAATGTCTCAGCTTCTATTTCTGGTGTTCGCCTTGGTGGAGGAATGAACTATACTGAAGCCCTGCTGCATCGCTTTGGAATAATTGCCCCTGATGGTGGCCCTGGATTGGGACTTAGTAAAGGGCTAGAAAACATACAATCAGGACCGTTGTCAAAACTCTTTAAAACATCACCTCTGGTTGTTGATAATCCAGAAAATGTACTTCGGTTTTCTCCAGATGGAAGTGTGATTGAAGGGAAGGAATCCAACTTTTTACACTTGAAAAAGCCAGATGATGTGGATGTTGCTGTAGAATTAAGAGATTGGTTATTTGCTCTTGAAGGGGCTCAAGAGATGGCTGAAAGTTGGTGGTTCTCCAGCCATGAAGATGTAGGCAGAGTTGAGAGGTGTTGGCACACAACTTTCAACAGTCTACGAGTACATGCGAAAAGCATCCCAAATAATGGAAGAACACAATCGAATGGAATGCAGCAATTTCCCGTACAGCTTATTACGGTTAGAGTTCGAGGGTTGGAGATCTTCAAGCCCCATATACGGAAGGACGTTCCCTCGTCCACGTTAATTGCCAATGGGATTAAACAGCCCACTGACACATTCGGGGGAGCTGGTCTTGAAGTTCGCTTGGTACTATGTGAGGACAATTTTGAAGATGAAATGACTAACTGGAAAGTGGAAAACGTAAAATTCTCCGTTCACAAACCGATTGAGGTGGTTGTAACGAAGGATGAGTTTCAGCACCTTGCTTTTCTGTGCAAATCTGAAATTGACTCAATGGGCCGGATAACAGCTGGGATTCTACGGCTCCTGAAGTTGGAAGGCTCTGTGGGCCAATCTGCAATGGATCAATTAAGCAACTTAGGAACTGAAGGCATTGACAAGATTTTCTTCCAGAGAGATGGTGGCGTCCAATCTCCATTGTCAACTCCCATCCGTGAAACTCCAAACAGATCAAAGATACGAACTTTAAATTTGCTTGAGGAAGCAGTCATGGATTCACAGGCCAAACTTGATGCTTTAATTGCTGAAGTTGGTACTTCAGAGACTTCTTCCAGTCGGCAGCACCTTGCTGTTGTGAATGAAGTCCGTCAAAAGATTGAGACTATGCAGAATCTATTGCTGCAATTGAGGAATCAACTTTAG 3354 0.4308 MESILARALEYTLKYWLKSFSRDQFKLQGRTVQLSNLDLNGDALHSSVGLPPALNVAMAKVGKLEIILPSVSNVQIEPIIVQIDRLDLVLEENTNFDASASPKGTAPSTASASTKGSGYGFADKIADGMTIQIHTVNLLLETRGGACRQGGSTWAPPMASITICNLLLYTTNEEWQITIQRAELNSPLGLEVQLHVTEAVCPALSEPGLRALLRFMTGIYVCLNRGDVDFKAQQRSTEAAGRSLVSIASISDDDDSNLTRITISGLFLRDTFSRHPCTLVQPSMHAMAGEAFDVPEFARSFCPPIYPLGEQKWQLIEGTPLICLHSLQIKPSPLPPAFASQTVIDCQPLMIHLQEESCLRIFSFLADGIVVNPGDVLPDFSVNSLIFTLKGLDLTIPLDETQINTPESNIDSAVQSFSGARLHIESLLFSDSPSLKLRMLNLEKDPACFCLWEGQPIDASIKKWTARASHLSLSLETCKGETGPQNSLGQSAGLWTCVELKDACVEAAMAMADGSLLLEVPPPGGIVRVGVACEQFLSNTSVEQLYFVLDLYSYFGRVGEKIAKAGKSKRLIDFREKSSSRQLMDKSSSIKFMDKVPSDTAVSLAVKDLQLRFLEFSLMNVEEMPLVQFIGDDLFITATHRTLGGAVVVSSALRWQSVEIDCVDAEAHLALENGSILNYVGSIPSISSNGYPQLRAVFWINNKRNNLSNGNALSFPFLDMRMEHVIPLNEQDIESHSLNVSASISGVRLGGGMNYTEALLHRFGIIAPDGGPGLGLSKGLENIQSGPLSKLFKTSPLVVDNPENVLRFSPDGSVIEGKESNFLHLKKPDDVDVAVELRDWLFALEGAQEMAESWWFSSHEDVGRVERCWHTTFNSLRVHAKSIPNNGRTQSNGMQQFPVQLITVRVRGLEIFKPHIRKDVPSSTLIANGIKQPTDTFGGAGLEVRLVLCEDNFEDEMTNWKVENVKFSVHKPIEVVVTKDEFQHLAFLCKSEIDSMGRITAGILRLLKLEGSVGQSAMDQLSNLGTEGIDKIFFQRDGGVQSPLSTPIRETPNRSKIRTLNLLEEAVMDSQAKLDALIAEVGTSETSSSRQHLAVVNEVRQKIETMQNLLLQLRNQL 1117
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele31g0873 1117 PANTHER UNCHARACTERIZED 176 240 IPR026728 -
Lele31g0873 1117 Coils Coil 1096 1116 - -
Lele31g0873 1117 Coils Coil 1060 1080 - -
Lele31g0873 1117 Pfam N-terminal region of Chorein or VPS13 1 99 IPR026854 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele31g0873 Lele-ChrLele31 16227473 16237947 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele29g0663 29 4151453 4158905 Lele31g0873 31 16227473 16237947 hybridization
Lele30g0734 30 11817661 11824971 Lele31g0873 31 16227473 16237947 hybridization