Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele30g0734 ATGGAGTCTATATTGGCGAGAGCGTTGGAGTACACTCTAAAGTACTGGCTCAAATCCTTCTCTAGAGATCAATTCAAGTTGCAGGGTCGGACGGTGCAGCTCTCGAATCTAGATTTAAATGGGGATGCTTTGCATTCGAGTGTTGGATTGCCACCTGCTCTGAATGTTGCGACGGCGAAAGTGGGAAAATTGGAGATCATACTTCCTTCGGTGAGCAACGTCCAAATAGAACCCATCATTGTGCAAATTGATCGTCTTGATTTGGTTCTTGAGGAGAATACTAATTTCGACGCATCTGCAAGTCCAAAGGGTACCGCGCCATCTACTGCCTCCACAAAGGGTAGTGGATATGGTTTTGCTGATAAGATTGCAGATGGAATGACTATACAGATTCATACAGTGAACTTGTTACTTGAAACTCGTGGAGGTGCTTGCCGCCAAGGGGGGTCAACTTGGGCACCGCCCATGGCATCTATCACCATATGCAATCTTTTGCTCTATACCACAAATGAAGAATGGCAGGTTGTTAATCTTAAGGAAGCCCGGGATTTCTCCAACAACAAGAAGTACATTTACGTGTTCAAAAAACTTGAATGGGAATCTTTGTCTATTGATCTTTTGCCACATCCTGACATGTTCACGGGTTCTACTTTAGGCCGCTCTCAAGAGGGAGCGAACCAGAGAGATGACGATGGTGCCAAGAGAGTTTTCTTTGGAGGCGAGCGATTCCTAGAAGGCATATCTGGAGAGGCATATATTACAATTCAGAGAACTGAATTAAACAGTCCACTTGGGCTTGAGGTTCAGTTACACATTACTGAAGCTGTGTGCCCTGCATTAAGTGAACCAGGACTGCGTGCTCTTCTTCGCTTTATGACGGGTATATATGTCTGCCTAAACAGAGGAGATGTTGATTTTAAGGCTCAACAGCGGTCTACAGAAGCTGCTGGGCGCTCTCTTGTCTCTATTGTTGTGGACCACATATTTTTCTGCATTAAAGATACTGAATTCAAGCTTGAGCTTTTAATGCAGTCTCTCTTCTTTTCTCGGGCTAGCATTTCTGACAACGACAACTCTAACTTAACAAGGATTACAATTTCTGGACTATTTCTGAGGGATACCTTCTCTCGCCATCCATGTACTTTGGTGCAACCATCAATGCACACTATGACAGGAGAAGCTTTGCATGTTCCAGAATTTGCTAGGAGCTTTTGTCCTCCTATATATCCATTAGGTGAACAGAAGTGGCAACTGATTGAGGGCACCCCTCTAATATGCCTTCATTCCCTACAGATCAAGCCTTCTCCCCTTCCACCAGCCTTTGCTTCTCAAACTGTTATCGACTGTCAGCCTTTGATGATTCATCTCCAAGAAGAATCCTGCTTGAGGATTTTTTCTTTCTTAGCTGATGGTATTGTTGTCAATCCTGGTGATATTTTGCCAGATTTCTCAGTAAATTCTCTCATTTTCACACTTAAGGGACTAGATCTTACAATTCCTTTGGACGAGACCCAAATAAATACTCATGAAAGAACCATGGACAGTGCAGTCCAGAGCTTCTTTTCTGGAGCAAGGCTTCATGTTGAAAGCCTTTTGTTTTCAGATTCACCCTCTTTGAAACTAAGAATGCTGAACCTGGAGAAGGATCCTGCTTGTTTCTGTCTTTGGGAAGGTCAACCAATTGATGCTAGCATTAAGAAGTGGACTGCCAGAGCATCACATCTTTCTTTGTCTCTAGAAACATGTAAAGGTGAAACTGGGCTTCAGAATTCTCTTGGACAGAGTGCAGGATTATGGAGATGTGTTGAACTGAAAGATGCTTGCGTTGAAGTAGCTATGGCAATGGCTGATGGCAGTCCATTATTAGAAGTCCCTCCACCTGGGGGTATTGTAAGGGTTGGAGTTGCATGTGAACAATTTTTATCCAACACTTCTGTTGAACAGTTATATTTTGTTCTTGATCTCTATGCTTATTTTGGGAGAGTTGGTGAGAAAATAGCAAAAGCTGGAAAAAGTAAACGACTGATAGATGTTAGGGAGAAATCTTCTAGTAGAAAGCTTATGGACAAATCTTCTAGTATAAAGTTTATGGACGAGGTTCCTAGTGACACTGCTGTAAGTTTGGCTGTGAAAGACCTCCAACTTCGATTTCTGGAATCTTCTTTAATGAATGTTGAGGAAATGCCTCTAGTGCAGTTTATTGGAGATGATCTGTTCATTAGGGCCACTCATAGAACCCTTGGTGGTGCCGTTGTTGTTTCATCCACTTTACGTTGGCAGAGTGTTAAGATAGATTGTGTGGATGCTGAGGCGCACCTGGCACTTGAAAATGGGTCAATTTTGAACTCTGTTGAAAGTATTCCCTCAATGAGTAGCAATGGATATCCTCAATTAAGAGGTGTATTTTGGATTAATAACAAAAGAAACAATCTGTCAAATGGAAATGCTCTCTCATTTCCTTTTCTGGATATACGCATGGAGCATGTCATTCCATTAAATGAACAAGACATCGAGTCTCATAGTTTGAATGTCTCAGCTTCTATTTCTGGTGTTCGCCTTGGTGGAGGAATGAACTATACTGAAGCCCTGCTGCATCGCTTTGGAATACTTGCACCTGATGGTGGCCCTGGATTGGGACTTTCTAAGGGGCTAGAAAATATACAATCAGGACCATTGTCTAAACTCTTTAAGACAGCACCTCTGGTTGTTGATAATCCAGGAGATGATGGAAGTGTGATTGAAGGGAAGGAATCCAACTTTTTACAATTGAAGAAGCCAGATGATGTGGATGTTGCCGTAGAATTGAGAGATTGGTTATTTGCTCTTGAAGGGGCTCCAGAGATGGCTGAAAGTTGGTGGTTCTCCAGCCATGAAGATGTAGGGAGAGTTGAGAGGTGTTGGCACACAACTTTCAACAGTCTACGAGTACATGCAAAAAGCAACCCAAAAGATGTTTCTAATGGAAGAGCACAATCGAAAGGAGCGCAGCAATTTCCTGTACAGCTGATTACGGTTAGAGTTCAAGGGTTGGAGATCTTCAAGCCCCATACACGGAAGGATGTTCCCTCATCCATGTTAATTGCCAATGGGATTAAACAGCCCACTGACACATTGGGGGGAGCTGCTCTTGAAGTTCGCTTGGTACTATGTGAGGACAATGTTGATGATGAAATGACTAACTGGAAAGTGGAAAACGTAAAATTCTCCGTTCACAAACCGATTGAGGTGGTAGTAACCAAGGATGAGTTTCAGCACCTTGCTTTTCTGTGCAAATCTGAAATTGATTCAATGGGCCGGATAACAGCTGGGATTCTACGGCTCCTGAAGTTGGAAGGTTCTGTTGGCCAGTCTGCAATGGATCAATTAAGCAACCTAGGAACTGAAGGAATTGACAAGATTTTCTTCCGGAGAGATGGTAGCGTCCAATCTCCATCGTCAACCCCCATCTGTGAAACTCCAAACAGATCAAAGAAACGAACTTTGAATTTGCTTGAGGAAGCAGTCATGGATTCACAGGCCAAACTTGATGTTTTAATTACTGAAGTTGGTACTTCAGGGACTTCTAGTCAGCAGCAGCAGCTTGCTGTTGTGAATGAAGTCCGTCAAAAGATTGATACTATGCAGAATCTTTTGGTGCAATTGAGGAATCAACTTTAG 3657 0.4285 MESILARALEYTLKYWLKSFSRDQFKLQGRTVQLSNLDLNGDALHSSVGLPPALNVATAKVGKLEIILPSVSNVQIEPIIVQIDRLDLVLEENTNFDASASPKGTAPSTASTKGSGYGFADKIADGMTIQIHTVNLLLETRGGACRQGGSTWAPPMASITICNLLLYTTNEEWQVVNLKEARDFSNNKKYIYVFKKLEWESLSIDLLPHPDMFTGSTLGRSQEGANQRDDDGAKRVFFGGERFLEGISGEAYITIQRTELNSPLGLEVQLHITEAVCPALSEPGLRALLRFMTGIYVCLNRGDVDFKAQQRSTEAAGRSLVSIVVDHIFFCIKDTEFKLELLMQSLFFSRASISDNDNSNLTRITISGLFLRDTFSRHPCTLVQPSMHTMTGEALHVPEFARSFCPPIYPLGEQKWQLIEGTPLICLHSLQIKPSPLPPAFASQTVIDCQPLMIHLQEESCLRIFSFLADGIVVNPGDILPDFSVNSLIFTLKGLDLTIPLDETQINTHERTMDSAVQSFFSGARLHVESLLFSDSPSLKLRMLNLEKDPACFCLWEGQPIDASIKKWTARASHLSLSLETCKGETGLQNSLGQSAGLWRCVELKDACVEVAMAMADGSPLLEVPPPGGIVRVGVACEQFLSNTSVEQLYFVLDLYAYFGRVGEKIAKAGKSKRLIDVREKSSSRKLMDKSSSIKFMDEVPSDTAVSLAVKDLQLRFLESSLMNVEEMPLVQFIGDDLFIRATHRTLGGAVVVSSTLRWQSVKIDCVDAEAHLALENGSILNSVESIPSMSSNGYPQLRGVFWINNKRNNLSNGNALSFPFLDIRMEHVIPLNEQDIESHSLNVSASISGVRLGGGMNYTEALLHRFGILAPDGGPGLGLSKGLENIQSGPLSKLFKTAPLVVDNPGDDGSVIEGKESNFLQLKKPDDVDVAVELRDWLFALEGAPEMAESWWFSSHEDVGRVERCWHTTFNSLRVHAKSNPKDVSNGRAQSKGAQQFPVQLITVRVQGLEIFKPHTRKDVPSSMLIANGIKQPTDTLGGAALEVRLVLCEDNVDDEMTNWKVENVKFSVHKPIEVVVTKDEFQHLAFLCKSEIDSMGRITAGILRLLKLEGSVGQSAMDQLSNLGTEGIDKIFFRRDGSVQSPSSTPICETPNRSKKRTLNLLEEAVMDSQAKLDVLITEVGTSGTSSQQQQLAVVNEVRQKIDTMQNLLVQLRNQL 1218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele30g0734 1218 PANTHER UNCHARACTERIZED 1 1216 IPR026728 -
Lele30g0734 1218 Coils Coil 1197 1217 - -
Lele30g0734 1218 Pfam N-terminal region of Chorein or VPS13 1 98 IPR026854 -
Lele30g0734 1218 Coils Coil 1161 1181 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele30g0734 Lele-ChrLele30 11817661 11824971 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele30g0734 30 11817661 11824971 Lele31g0873 31 16227473 16237947 hybridization
Lele30g0734 30 11817661 11824971 Lele32g0645 32 4033578 4044324 hybridization