Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele29g0663 ATGGAGTCGATATTGGCGAGAGCGTTGGAGTACACTCTCAAGTACTGGCTCAAATCCTTCTCTAGAGATCAATTCAAGTTGCAGGGTCGGACGGTGCAGCTCTCGAATCTAGATTTAAACGGGGATGCTTTGCATTCGAGTGTTGGATTGCCACCTGCTCTGAATGTTGCGACAGCTAAAGTGGGGAAATTGGAGATCATACTTCCTTCGGTGAGCAACGTACAAATAGAACCCATCATTGTGCAAATTGATCGTCTTGATTTGGTTCTCGAGGAGAATACTAATTTCGACGCATCTGCAAGTCCAAAGGGTACAGAGCCATCTACTGCCTCTGCCTCCACAAAGGGTAGCGGATATGGTTTTGCTGATAAGATTGCAGATGGAATGACTATACAAATTCATACAGTGAACTTGTTACTTGAAACTCGTGGAGGTGCTTGCCGCCAAGGGGGATCAACTTGGGCACCGCCTATGGCATCTATCACCATATGCAATCTTTTGCTCTATACCACAAATGAAGATTGGCAGATTACGATCCAGAGAACTGAATTAAACAGTCCACTTGGGCTTGAGGTTCAGTTACACATTACTGAAGCTGTGTGCCCAGCATTAAGTGAACCAGGATTGCGCGCTCTTCTCCGCTTTATGACGGGTATATATGTCTGCCTAAACAGAGGAGATGTTGATTTTAAGGCTCAACAGCGGTCTACAGAAGCAGCTGGGCGCTCTCTTGTCTCTATTGCTAGCATTTCTGATGACGACGACTCTAACTTAACAAGGATTACAATTTCTGGACTATTTCTGAGGGATACCTTCTCTCGCCATCCATGTACCTTGGTGCAACCATCAATGCACGCTCTGACAGGAGAAGCTTTCAACGTTCCAGAATTTGCTAGGAGCTTTTGTCCTCCTATATACCCATTAGGTGAACAGAAGTGGCAACTGATTGAGGGTACCCCTCTAATATGCCTCCATTCCTTACAGATCAAGCCTTCTCCCCTTCCACCAGCCTTTGCTTCTCAAACTGTTATTGACTGTCAGCCTCTGATGATTCATCTCCAAGAAGAATCCTGCTTGAGGATTTTTTCTTTCTTAGCTGATGGCATTGTTGTCAATCCTGGTGATGTTTTGCCAGATTTCTCAGTAAATTCTCTCATTTTCACACTCAAGGGACTAGATCTTACAATTCCTTTGGACGAGACCCAAATAAATACTCCTGAAAGCAACATAGACAGCGCAGTCCAGAGCTTTTCTGGAGCAAGGCTTCATATTGAAAGCCTTTTGTTTTCAGATTCACCCTCTTTGAAACTAAGAACGCTGAACCTGGAGAAGGATCCTGCTTGTTTCTGTCTTTGGGAAGGTCAACCAATTGATGCTAGCATTAAGAAGTGGACTGCTAGAGCATCACATCTTTCTTTGTCTCTAGAAACATGTAAAGGAGAAACTGAACCACAGAATTCTCTTGGACAGAGTGCAGGATTATGGACATGTGTTGAACTGAAAGATGCTTGCGTTGAAGTGGCTATGGCAATGGCTGATGGCAGTCCATTATTAGAAGTCCCTCCACCTGGGGGTATTGTAAGGGTTGGAGTTGCATGTGAACAATTTTTATCCAACACTTCTGTTGAACAGTTATATTTTGTTCTTGATCTCTATTCTTATTTTGGGAGAGTTGGTGAGAAAATAGCACAAGCTGGAAAAAGTAAACGACTGATAGATGTTAGGGAGAAATCTTCTAGTAGAAAGCTTATGGACAAATCTTCTAGTATAAAGTTTATGGACAAGTTTCCTAGTGACACTGCTGTAAGTTTAGCAGTGAAAGACCTCCAACTTCGATTTCTGGAATCTTCTCTAATGAATGTTGAGCAAATGCCTCTAGTGCAGTTTATTGGAGATGATCTGTTTATTAGTGCCACTCATAGAACCCTTGGTGGTGCCGTTGTTGTTTCATCCGCTTTACGTTGGCAGAGTGTTGAGATAGATTGTGTGGATGCTGAGGCGCACCTGGCACTTGAAAATGGCTCCATTTTGAATTCTGTTGGAAGTATTCCCTCAATGAGTAGTAATGGATATCCTCAATTAAGAGCTGTTTTTTGGATTAATAGCAAAAGAAACAATCTGTCAAATGGAAATGCTCTCTCCTTTCCTTTTCTGGATATGCGCATGGAGCATGTCATTCCATTAAATGAACAAGACATCGAGTCACATAGTTTGAATATCTCAGCTTCTATTTCTGGTGTTCGCCTTGGTGGAGGAATGAACTATACTGAAGCCCTGCTGCATCGCTTTGGAATACTTGCACCTGATGGTGGCCCTGGATTGGGACTTAGTAAAGGGCTAGAAAACATACAATCAGGACCATTGTCTAAACTCTTTAAAACATCACCTCTGGTTGTTGATAATCCAGAAAATGTACTTCGTTTTTCTCCAGATGGAAGTGTGATTGAAGGGAAGGAATCCAACTTTTTACACTTGAAAAATCCAGATGATGTGGATGTTGCTATAGAATTAAGAGATTGGTTATTTGCTCTTGAAGGGGCTCAAGAGATGGCTGAAAGTTGGTGGTTCTCCAGCCATGAAGATGTAGGCAGAGTTGAGAGGTGTTGGCACACAACTTTCAACAGTCTACGAGTACATGCGAAAAGCATCCCAAATGATGGAAGAACACAATTGAATGGAATGAAGCAATTTCCTGTACAGCTTATTACGGTTAGAGTTCAAGGGTTGGAGATCTTCAAGCCCCATACACGGAAGGACGTTCCCTCGTCCACGTTAATTGCCAATGGGGTTAAACAGCCCACTGACACATTCGGGGGAGTTGGTCTTGAAGTTCGCTTGGTACCATGTGAGGACAATGTTGAAGATGAAATGACTAACTGGAATGTGGAAAACGTAAAATTCTCCGTTCACAAACCGATTGAGGTGGTTGTAACGAAGGACGAGCTTCAGCACCTTGCTTTTCTGTGTAAATCTGAAATTGACTCAATGGGCCGGATAACAGCTGGGATTCTACGGCTCCTGAAGTTGGAAGGCTCTGTTGGCCAATCTGCAATGGATCAATTAAGCAACCTAGGAACTGAAGGCATTGACAAGATTTTCTTCCAGAGAGATGGTCGCGTCCAATCTCCATTGTCAACTCCCATCTGTGAAACTCCAAACAGATCAAGGAAACGGACTTTAAATTTGCTTGAGGAAGCAGTCATGGATTCACAGGCCAAACTTGATGCTTTAATTACTGAAGTTGGTACTTCAGGGACTTCTTCCAGTCAGCAGCCCCTTGCTGTTGTGAATGAAGTCCGTCAAAAGATTGAGACTATGAAGAATCTATTGCTGCAATTGAGGAATCAACTTTAG 3354 0.4302 MESILARALEYTLKYWLKSFSRDQFKLQGRTVQLSNLDLNGDALHSSVGLPPALNVATAKVGKLEIILPSVSNVQIEPIIVQIDRLDLVLEENTNFDASASPKGTEPSTASASTKGSGYGFADKIADGMTIQIHTVNLLLETRGGACRQGGSTWAPPMASITICNLLLYTTNEDWQITIQRTELNSPLGLEVQLHITEAVCPALSEPGLRALLRFMTGIYVCLNRGDVDFKAQQRSTEAAGRSLVSIASISDDDDSNLTRITISGLFLRDTFSRHPCTLVQPSMHALTGEAFNVPEFARSFCPPIYPLGEQKWQLIEGTPLICLHSLQIKPSPLPPAFASQTVIDCQPLMIHLQEESCLRIFSFLADGIVVNPGDVLPDFSVNSLIFTLKGLDLTIPLDETQINTPESNIDSAVQSFSGARLHIESLLFSDSPSLKLRTLNLEKDPACFCLWEGQPIDASIKKWTARASHLSLSLETCKGETEPQNSLGQSAGLWTCVELKDACVEVAMAMADGSPLLEVPPPGGIVRVGVACEQFLSNTSVEQLYFVLDLYSYFGRVGEKIAQAGKSKRLIDVREKSSSRKLMDKSSSIKFMDKFPSDTAVSLAVKDLQLRFLESSLMNVEQMPLVQFIGDDLFISATHRTLGGAVVVSSALRWQSVEIDCVDAEAHLALENGSILNSVGSIPSMSSNGYPQLRAVFWINSKRNNLSNGNALSFPFLDMRMEHVIPLNEQDIESHSLNISASISGVRLGGGMNYTEALLHRFGILAPDGGPGLGLSKGLENIQSGPLSKLFKTSPLVVDNPENVLRFSPDGSVIEGKESNFLHLKNPDDVDVAIELRDWLFALEGAQEMAESWWFSSHEDVGRVERCWHTTFNSLRVHAKSIPNDGRTQLNGMKQFPVQLITVRVQGLEIFKPHTRKDVPSSTLIANGVKQPTDTFGGVGLEVRLVPCEDNVEDEMTNWNVENVKFSVHKPIEVVVTKDELQHLAFLCKSEIDSMGRITAGILRLLKLEGSVGQSAMDQLSNLGTEGIDKIFFQRDGRVQSPLSTPICETPNRSRKRTLNLLEEAVMDSQAKLDALITEVGTSGTSSSQQPLAVVNEVRQKIETMKNLLLQLRNQL 1117
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele29g0663 1117 Coils Coil 1096 1116 - -
Lele29g0663 1117 MobiDBLite consensus disorder prediction 97 116 - -
Lele29g0663 1117 Coils Coil 1060 1080 - -
Lele29g0663 1117 Pfam N-terminal region of Chorein or VPS13 1 101 IPR026854 -
Lele29g0663 1117 PANTHER UNCHARACTERIZED 176 240 IPR026728 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele29g0663 Lele-ChrLele29 4151453 4158905 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele29g0663 29 4151453 4158905 Lele31g0873 31 16227473 16237947 hybridization
Lele29g0663 29 4151453 4158905 Lele32g0645 32 4033578 4044324 hybridization