Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele31g0773 ATGAAACAGAAGGCTATTATTAGTGATGTGATTGACGTTGACAATGATGAGGACTCTGCTGATCTAGTGTTTATTGGTGAAAAAGTTGGGGGAAGCAACAAGGGAAAGGAAATATCACAGGAACATTTCGGACCAGCTAGTGGGCTTGAGTCCTCCAGTGTTTATGCTTCAGTATCACGTAACGTAATCAATGTTGATGGTCACAGTTCTGATTTATCAAATGATGATGACGATGACTACAATGATCATTTTGCTGAAGATTTCATGGATGTCGATCAGTACGCCTTGTTACAGGCACACTTTGACCATGTGGATATACCTGCTGGAATTGAGGCACCCATTCCCTGGATGTCAAATTTTGATCTGAAATCTGAAACTAGTTCTTCGAATCCTTGGGGTAATATGCAGTTAGATGCTAAAAGTTCTAATGTGACAGACTTATCTCAGCTTTCCTGGGCAATAGAGTCTTCTGACCTCATCCAAGAAACTCCAGTTTGTAGTTCTAGTTCCCTAACCAAAAATGTTGCTGTTAATCCTTCTACTCAAACTCAGTTACATACTGAAGCTGCTCCTGATAAAAAGCAATCAACTTTTTCACAACTGGATGGGCTTAAGCTGAACTTGAATCTAGCACTAGGGGTAGATTCATCCAAACCTCATTGGTTCAAGGGACCTTTCAGTCGTAAGAAGAAGCTTTCTATTTTAGGTGACTTTCATAATGATGCTTTAGCACACAAGTCAGAGTCCTTGAAGCTGCCACCTGGAGGTGAACCCCCTTATTGGGGGAAAGCTAAAAGTGCAAAAAAGGCACATGGCAAAGATGTTCTGTTCCATCCGAAATTCTTTCCACCTTTTGAAGTGTCACACCATTTTCCTGGATTGGAGTCAGCAAACTCTAATATATGGAAGAATCCTCCTAACCTGCCTTTTACAGATCATTCAGATAATTTAGGTCTTTATTGTCCATTTGATCCTCTTGATGCCCCTCTTCCAATGTTTGGTAATACTTGGTTTCACAATTATGCCAGTGAAGAAAAGAATGAAACCACTGCTAACATCCCGGTTGTGACAATACCTGATGAAGACAGGGATGAAATCTTGAAGAAATTCCAAGATTTTAAACAGTTTGACACAGTTGAAGATGCTTCAGACCATTACTATAATCGCAAGAGTTATTCCTTGAAGCAGAATTCAAAGAATTGGTCCAAGAGAATTCAGGAAGAGTGGAGGATTTTGGAGAAGGATTTGCCTGATTCAATATTTGTTAGAGTTTATGAATCAAGGATGGATATTTTGAGAGCTGTAATTATTGGAGCAGAGGGAACTCCTTATCATGATGGTCTCTTCTTTTTTGATGTTTTCTTTCCCAGTGGCTACCCCATTGTGCCACCGGAAGTCCACTACCACTCTGGTGGTGTTAGGATCAACCCAAATTTGTATAACTGCGGCAAAGTATGCCTTAGTCTGCTTAATACTTGGTCTGGTAATAAGAATGAGAAGTGGCTTCCTGGTGTTTCAACAATTCTACAGGTTCTTGTTTCTATACAAGGTTTAATCTTGAATACAAAGCCTTATTTTAATGAGCCTGGGTATGCTCATATGAGTGGTTCTACTGCTGGCGAACTGAGGTCCCTGCAGTATAATGAGGATGCATTTATTCTATCATTGAAGACAATGACGTACGTGATGAGAAAGCCTCCAAAGCATTTTGAGGACTTCGTTGCAGGGCATTTCTGCAACCGGGCTCACGATATCTTGGTGGCATGTAAAGCATACATAGAAGGTGCTCAAGTTGGCTGTTTGGTCAAAGGTGGGGTGCAGGACGTTGACGCGGGTGACCGGAGCTGCTCGAAGCAGTTTAAGGATACTTTAGCTGGATTTGTGAATGGGCTTGTCGGAGAATTTTCCAAAGTTGGAGCTAAGGACTGTGAGAAATTCTTGCCGCAGGCGGCGACAACTGGGAACAATCTGGCAGGTTGTTGCCCTGATGCTGCTGTTCCTGCTATCTCAACTCTTTCCCCTGAAGCCCAATTTTGA 2037 0.4178 MKQKAIISDVIDVDNDEDSADLVFIGEKVGGSNKGKEISQEHFGPASGLESSSVYASVSRNVINVDGHSSDLSNDDDDDYNDHFAEDFMDVDQYALLQAHFDHVDIPAGIEAPIPWMSNFDLKSETSSSNPWGNMQLDAKSSNVTDLSQLSWAIESSDLIQETPVCSSSSLTKNVAVNPSTQTQLHTEAAPDKKQSTFSQLDGLKLNLNLALGVDSSKPHWFKGPFSRKKKLSILGDFHNDALAHKSESLKLPPGGEPPYWGKAKSAKKAHGKDVLFHPKFFPPFEVSHHFPGLESANSNIWKNPPNLPFTDHSDNLGLYCPFDPLDAPLPMFGNTWFHNYASEEKNETTANIPVVTIPDEDRDEILKKFQDFKQFDTVEDASDHYYNRKSYSLKQNSKNWSKRIQEEWRILEKDLPDSIFVRVYESRMDILRAVIIGAEGTPYHDGLFFFDVFFPSGYPIVPPEVHYHSGGVRINPNLYNCGKVCLSLLNTWSGNKNEKWLPGVSTILQVLVSIQGLILNTKPYFNEPGYAHMSGSTAGELRSLQYNEDAFILSLKTMTYVMRKPPKHFEDFVAGHFCNRAHDILVACKAYIEGAQVGCLVKGGVQDVDAGDRSCSKQFKDTLAGFVNGLVGEFSKVGAKDCEKFLPQAATTGNNLAGCCPDAAVPAISTLSPEAQF 678
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele31g0773 678 ProSiteProfiles Ubiquitin-conjugating (UBC) core domain profile. 400 560 IPR000608 -
Lele31g0773 678 SMART ubc_7 403 560 - -
Lele31g0773 678 SUPERFAMILY UBC-like 389 569 IPR016135 -
Lele31g0773 678 CDD UBCc 402 529 IPR000608 -
Lele31g0773 678 FunFam Probable ubiquitin-conjugating enzyme E2 23 363 639 - -
Lele31g0773 678 PANTHER (E3-INDEPENDENT) E2 UBIQUITIN-CONJUGATING ENZYME 91 642 - -
Lele31g0773 678 Pfam Ubiquitin-conjugating enzyme 404 528 IPR000608 -
Lele31g0773 678 Gene3D Ubiquitin Conjugating Enzyme 360 632 IPR016135 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele31g0773 Lele-ChrLele31 15434333 15440871 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele31g0773 349 650 Miscellaneous Gene Families AT2G33770 46.497 6.49e-85 284
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele29g0768 29 4965471 4970632 Lele31g0773 31 15434333 15440871 hybridization
Lele30g0636 30 11041610 11055690 Lele31g0773 31 15434333 15440871 hybridization