Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele31g0696 ATGAGGGGGGAAGAAATTGAGAAGCTTCGAGGTGTCGTGAGGGACTGTGTTAGCAAGCATCTGTACTCTTCTGCCATCTTCTTCGCAGACAAAGTCGCTGCCTTTACCAATGATCCCGCCGATATCTACATGCAGGCTCAGGCCCTCTTCCTTGGCCGCCATTACCGTCGTGCCTTTCATCTCCTCAATGCCTCTAAGATAGTTCTCCGTGATCTCCGCTTCCGCTACCTCGCTGCCAAGTGTCTTGAGGAGCTCAAGGAATGGGATCAATGCCTATTAATGCTGGGTGAGGCTAAAGTGGATGATCAAGGCAATGTTTCAGATACAAAGGATTCTAATGTCATGTACTTGGATAAAGATGGCGAAGACCGTGAGATCAATATATCTTCTGCAATATGTTTCTTAAGAGGCAAAGCACATGAAGCTCTAGAAAACCGTGCCCAGGCTCGATTGTGGTACAAAGCTGCTATAAAAGCTGACCCTTTATGCTATGAGGCTCTGGAATGTCTTATTGAAAATCACATGATCACGTGTGAGGAGGAAGCAAATTTGATCTCATCGTTGCAATTTGGTAGTGAAGATGGTTGGCTTTCATCATTCTATTCATGCTTGATAAAGAAGTATGAGAAGGAAAATGTTGTGGAAGCCAAGTTTCGAGACCTTGAGAACACAAGCTGTAAAATTGACCAATCTAATCCTTCTTTCTTGCGTAAGCTGAAAACCAATACTGACCTATTAGCCTGCAAAGCTGAATACTACCATCAGTGTGGTGAATATCAGAAATGTTTTGAGTTAACATCTGTTCTGCTTGAGAAGGATCCTTTCCATAACAAGACTACCTTAGTACATCTGGGAGCTGCTATGGAGCTTGGACATTCAAATGAGCTCTATCTGATGGCATGCAATCTTGTGAAGGATTATCCTCAAAAGGCCTTATCTTGGTTTGCGGTTGGTTGCTATTACTATTGTATCAAGAAGTATGACCAGTCCCGTCGATATTTCAGCAAGGCAACAAGTCTAGATGGAACATTTGCACCGGCTTGGATAGGCTATGGGAATGCATATGCTGCTAAAGAAGAGGGTGATCAAGCCATGTCTGCTTACCGCACTGCAGCTCGTTTATTTCCTGGGTGCCATTTGCCAACTCTTTACATTGGAATGGAATGCATGCGTACTCACAGCTATAAGCTTGCTGAGCAGGCTAAGGCAATTTGCCCCTCAGATCCACTTGTATTTAATGAACTTGGAGTTGTTGCCTACCATATGCAAGAGTATAACAAAGCAGTATGGTGGTTTGAGAAAACATTAGCCCTCATCCCATCCTCTTTTAGTGAAATGTGGGAACCAACTGTAGTTAATCTTGCCCATGCCTACAGGAAGTTGAAGATGTATGATGAAGCAGTTTCATACTACGAGAAAGCACTTGCATTGTCAACAAGAAGTTTGAGCACGTATGCTGGTCTAGCATATACATACCACTTGCAGGATGACTTCACTACAGCTATTACTTACTATCACAAAGCTTTGCGGCTTAAACCAGATGACCAATTCTGCACTGAAATGTTAAGTGGGGCTCTTATAGACGAAAGCCGATGTGGGCCCCCGTCTATCCCTTAG 1617 0.4372 MRGEEIEKLRGVVRDCVSKHLYSSAIFFADKVAAFTNDPADIYMQAQALFLGRHYRRAFHLLNASKIVLRDLRFRYLAAKCLEELKEWDQCLLMLGEAKVDDQGNVSDTKDSNVMYLDKDGEDREINISSAICFLRGKAHEALENRAQARLWYKAAIKADPLCYEALECLIENHMITCEEEANLISSLQFGSEDGWLSSFYSCLIKKYEKENVVEAKFRDLENTSCKIDQSNPSFLRKLKTNTDLLACKAEYYHQCGEYQKCFELTSVLLEKDPFHNKTTLVHLGAAMELGHSNELYLMACNLVKDYPQKALSWFAVGCYYYCIKKYDQSRRYFSKATSLDGTFAPAWIGYGNAYAAKEEGDQAMSAYRTAARLFPGCHLPTLYIGMECMRTHSYKLAEQAKAICPSDPLVFNELGVVAYHMQEYNKAVWWFEKTLALIPSSFSEMWEPTVVNLAHAYRKLKMYDEAVSYYEKALALSTRSLSTYAGLAYTYHLQDDFTTAITYYHKALRLKPDDQFCTEMLSGALIDESRCGPPSIP 538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele31g0696 538 Gene3D Tetratricopeptide repeat domain 5 527 IPR011990 GO:0005515
Lele31g0696 538 ProSiteProfiles TPR repeat profile. 409 442 IPR019734 GO:0005515
Lele31g0696 538 PANTHER CELL DIVISION CYCLE 16,23,27 22 519 - -
Lele31g0696 538 SMART tpr_5 345 378 IPR019734 GO:0005515
Lele31g0696 538 SMART tpr_5 448 481 IPR019734 GO:0005515
Lele31g0696 538 SMART tpr_5 130 163 IPR019734 GO:0005515
Lele31g0696 538 SMART tpr_5 243 276 IPR019734 GO:0005515
Lele31g0696 538 SMART tpr_5 482 515 IPR019734 GO:0005515
Lele31g0696 538 SMART tpr_5 409 442 IPR019734 GO:0005515
Lele31g0696 538 SMART tpr_5 311 344 IPR019734 GO:0005515
Lele31g0696 538 SUPERFAMILY TPR-like 37 172 IPR011990 GO:0005515
Lele31g0696 538 ProSiteProfiles TPR repeat profile. 311 344 IPR019734 GO:0005515
Lele31g0696 538 ProSiteProfiles TPR repeat profile. 345 378 IPR019734 GO:0005515
Lele31g0696 538 Pfam Anaphase-promoting complex, cyclosome, subunit 3 19 97 - -
Lele31g0696 538 ProSiteProfiles TPR repeat profile. 482 515 IPR019734 GO:0005515
Lele31g0696 538 ProSiteProfiles TPR repeat profile. 448 481 IPR019734 GO:0005515
Lele31g0696 538 Pfam Tetratricopeptide repeat 132 161 IPR019734 GO:0005515
Lele31g0696 538 Pfam Tetratricopeptide repeat 452 512 - -
Lele31g0696 538 SUPERFAMILY HCP-like 313 516 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele31g0696 Lele-ChrLele31 14814390 14822967 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele31g0696 290 514 Glycosyltransferase AT3G04240 23.913 1.97e-10 61.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele29g0835 29 5580256 5588909 Lele31g0696 31 14814390 14822967 hybridization
Lele30g0564 30 10440352 10451560 Lele31g0696 31 14814390 14822967 hybridization