Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele31g0224 ATGAACCGTGATCTCCTGGGGTACAGCAGAATCTCATGCTACTTCACTACTTCTTTCTTTAATTTAAAGGTTCCTGAATTTCATCGGAAAAACGATTTAAAATATCTACTTCAAATACAGTTTCTCGGCATGGAAATTCTATCGTATGGTTCGGCACCATGTTGTTATGTAGTGAACTCAAAGTCCAAATTGAGTGAAAGGAGCTTCAATTCCCGACAATTAGGGTTTCTCACTGCGGGAAATCATGGAATTCATGATAACAACACCGTTTCTAGATTCTATAACATTGAAAGATCTCATAGGACCTTAAATACTCTTAAAGGCTCTAAACAAAATAATTCCAAGGTTTATAGAGGAGGCTATGATGGTTTTGTGATCGATGGTGAAGGGGATGTAAGAGATATCTCAGGAATAGAACAACCTGCTACTAAGGTTCTCATTCCTGGTCTGCCAAATGAGCCCAAGGGGGAATGTGGTGCTGTGATAAGAAGTTGCTTTTGGGAGTGGAAGCCAAAGCTTAATGTACATTATGAAAAGGCCGGGTGTGAAAATTTGGAATCCCCACAGATTCTCTTTCTTCCTGGTTTTGGTGTTGGTGCTTTCCATTATGAGAAGCAAATGAAGGATTTGGGCCGTGACTTTAGAGTATGGGCACTGGATTTCCTCGGTCAAGGGATGTCACTGCCTTTTGAAGATCCCACACTTCAGTCTAAAGCAGGTGGTGCAGCTAATGGCGAAACTTCTTCGTGGGGTTTCGGAGATGAAACTGAACCATGGGCAGAAAAGCTTGTGTACTCTATGGATTTATGGCAGGATCAAGTTCGCTACTTTATAGAAAAGGTAATTGGCGAACCGGTCTATATTGTGGGCAACTCATTAGGAGGATTTGTTGCGTTGTATTTTGCAGCATGTAATCCTCATTTAGTAAAGGGTGTCACATTGCTCAATGCAACACCGTTTTGGGGGTTTTTCCCCAATCCGGTGAGAAATCCAGGACTTGCAAAAATATTTCCATGGGCAGGAACATTTCCTCTACCCCCTCGTGTGAAGAGGCTGACAGAGTTGTTGTGGGAGAAAATTAGTGATCCAAAAAGTATCGCTGAGATACTTAAGCAGGTTTATGCAGATCATTCAACAAAGGTAGATAATGTGTTTTTACGTATAGTTGAAACGACAAGGCATCCAGCTGCTGCTGCATCATTTGCTTCAATTATGTTTGCTCCTCAGGCAGAATTATCCTTCGAGGACGCATTATCTAGATGTCGAGCCAACAACGTGTCAATCTGCCTCATGTATGGTAAAGAAGATCCCTGGGTGAGGCCAATTTGGGGACTTCAGGTTAAAAAGAAGGTTCCTGAAGCTCCATATTATCAAATCAGCCCAGCTGGTCATTGTCCTCATGATGAAGTTCCAGAGGTAATAAATTTCTTACTACGTGGGTGGATAAAGAACCTGGAGTCTCAAGGTTCATTCTCACTGCCTCTGCTTGATGACTCATACAATAGTACAAAATTCAGCATAGCCAAGGAGCTAGAATTTATGAGAGAAGGCTCAAAAAAGTCAGTGATGGTTAGATATGTAGGTAATATTAGTTTCTCACTTTGGGACAGGATCCGATCTTACATCAATTCTCAGGCCAAGATGAGGAACTTGTCACTCAAATCTTGGTCATAG 1674 0.417 MNRDLLGYSRISCYFTTSFFNLKVPEFHRKNDLKYLLQIQFLGMEILSYGSAPCCYVVNSKSKLSERSFNSRQLGFLTAGNHGIHDNNTVSRFYNIERSHRTLNTLKGSKQNNSKVYRGGYDGFVIDGEGDVRDISGIEQPATKVLIPGLPNEPKGECGAVIRSCFWEWKPKLNVHYEKAGCENLESPQILFLPGFGVGAFHYEKQMKDLGRDFRVWALDFLGQGMSLPFEDPTLQSKAGGAANGETSSWGFGDETEPWAEKLVYSMDLWQDQVRYFIEKVIGEPVYIVGNSLGGFVALYFAACNPHLVKGVTLLNATPFWGFFPNPVRNPGLAKIFPWAGTFPLPPRVKRLTELLWEKISDPKSIAEILKQVYADHSTKVDNVFLRIVETTRHPAAAASFASIMFAPQAELSFEDALSRCRANNVSICLMYGKEDPWVRPIWGLQVKKKVPEAPYYQISPAGHCPHDEVPEVINFLLRGWIKNLESQGSFSLPLLDDSYNSTKFSIAKELEFMREGSKKSVMVRYVGNISFSLWDRIRSYINSQAKMRNLSLKSWS 557
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele31g0224 557 SUPERFAMILY alpha/beta-Hydrolases 163 482 IPR029058 -
Lele31g0224 557 Pfam Alpha/beta hydrolase family 190 473 IPR000073 -
Lele31g0224 557 Gene3D alpha/beta hydrolase 160 485 IPR029058 -
Lele31g0224 557 FunFam Pheophytinase, chloroplastic 158 485 - -
Lele31g0224 557 PANTHER PHEOPHYTINASE, CHLOROPLASTIC 44 548 IPR044211 GO:0015996|GO:0080124
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele31g0224 Lele-ChrLele31 2294209 2298349 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele29g1351 29 20170754 20174480 Lele31g0224 31 2294209 2298349 hybridization
Lele30g0203 30 2389104 2392662 Lele31g0224 31 2294209 2298349 hybridization