Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele31g0201 ATGGCATTTCACGTTGCTTGCCCAATTACATGTCGCCGAATCTGCTTCTGCTCGCTAGGGTTTCCTCGCGCCCTCCATACATCGAAGGCCAAGCATGAGTTCCTGGACGATGTAGCAAGAATCGATGAGTTTCTCAAGGATCCTTTGGGAATTAGGGCTTCAGAAAGGGAACGGACCGTGCAAGTCGCAGTCCCTAAGGTTGAGCCGCCGCCTCAGCGGCAGTTGCAGTCAACACCGGCGGCTGATGGGGTCCCCGTTGTCGATGAGGTGGACGAGGCAGTGTCAACTAAGGCTAAGATGGTCGCTTTGCAGCGGAAGGGGGCTGCCGCGATGATTGCTGCCGAGGAGTACGCCCGTCAGTTTGAGTCCGCCGATGCGGTGGATGCATATGGGAATCTTGCTGGAGAAGAGAATGGTAATTTGAATGTCAAAGTATTTTGCCGAATGTGCAATCGTGTTGAAAATGAGGGAAGTGAAAGAGCTAAAAAAATGCTTTCTTGCAAAAGTTGTGGCAAGAAGTACCATCGGACCTGCTTAAAAAGTTGGGCTCAACATAGAGATTTATTTCATTGGAGTTCATGGACTTGTCGTGCTTGCCGAATTTGTGAGGCCTGTAGAAGGACAGGAGATCCAAGTAAGTTCATGTTTTGTAAAAGGTGTGATGGTGCTTATCATTGTTATTGTCTCCATCCTCCTCACAAGAATGTTAGTTCTGGGCCTTATTTGTGCTCAAAACATACAAGGTGTCACAGCTGTGGATCCAATGTTCCTGGAAATGGTCTAAGTGTGAGGTGGTTTCTGGGATACACCTGCTGTGATGCATGTGGAAGATTGTTTGTGAAAGGAAACTACTGTCCTGTTTGTCTGAAGGTCTATAGAGATTCAGAATCGACACCAATGGTTTGCTGTGATGTTTGCCAGCGTTGGGTGCACTGCCAGTGTGATAATATAAGGTTAGAAAAGTTTTGCAGTGATGAAAAATATCTTCAATTTCAAGTGGATGGGAATCTGCAGTATAAATGCCCCACATGTCGTGGGGAATGTTATCAGGTCAAGGATCTTGAGGATGCTGTTAAAGAACTTTGGAAGAGAAGAGATATTGCTGACAGAGATTTAATTGCCAGCTTGAGGGCTGCAGCTGCTTTACCGACTCAAGAAGAAATATTTTCTATTTCACCATATTCAGATGATGAGGATAGTGAGCCTGTAAAAGCAAAGAGTGAATCTGTGCGATCTTTTAAGTTCTCTCTGAAGAATTTCTCTGATAATTCACCAAAGAAGACAAAAGATTATGCAAAGAAATGTTCAAGTAAAAAGCGTTCCAAGAAAAAGGACTATCAGACTGGTAAAACTGATCCAAGTTTGGAAGGACATAGTGATGTCAAATCTGTGCATAGCTTGGATGATGATATCCAATCGCACAGACAGGAAGGTCCTGATGTTTATTCTTCACCTGCTGGTGGAAGCCTGAGTCAAACTGAAGGTTATGCTAATCAGCCAGGGATTTTGAAACAGAAGTTTGTAGATGAGGTGATGATCAGTGATGAAGAGAGAAAACTTAGAGTTGTTCGAATTAAGAGCAGTAAGGCTCAAACTCTCGATAGTGAAGAGGAGGCTGGAAAAAGTGGTGATAAGAATCAGAATGTAAAGGGAAAGAAGTTGGTTATAAATTTTGGGGCACGGAAAATTAATGCGACTAATTCTCCACGGTCTGATACTTCAAGTTGCCAAAGAGATCAAGATCTTGTTAGCACTAATGGCAATGAAGATATTCGCCAATCGGGGAAAGGAGACAAGTTTATGTTAGACAGACATGATGGCACAGCTAGAAATGCTGATGGTAAAGGAAACAGAGTTGATTCTCACCAATCAAAAGATTTAAAGGTTTCAGGAAGAGAAGGAAATTTGATAAAGCCTGCAAAAGTTAAGCCAGAAGTTTCTGAATTAAACTCGGCCTCTGTTAGGAGCAATATTGCTGATGGGAGTGAATCTGGTCCCATAGAGCGACCTCGTATCTTGATTGGAAAGCGCCGCACTGAGGGGAAGACTGGTCAAGATGGAACTGCACAAACTACGTCACAAGGTGAGAGGATGTTTTTGGTGAAGCAGTCAGAAGGCAGGTCTGATGCATATGATGAGACAGATGACAATGCTAATCATATACCATCACATTCTTTGCCAAAAGACCCTAAACCTTTATTGAGATTGAAATTTAAGAAACCTAGCATTGAAAGTCAAAATTCTCTTCATCTTGAGGATGAGAGGATTACAATCAAGGGACAGAGGTCAAAAAGGAAAAGGCCTTCGCCTTTTATGGAGAAAATGTCCAACAATGAGGATGAAGATGTTGCACAATCGCATCAAGATGGTCCAATAGATGAAATCATGGATGCTAATTGGATACTGATGAAATTGGGTAAAGATGCCATTGGAAAGAGAGTTGAAATTCACAAGTCATCTGACAATTCTTGGCACAAGGGATCGGTCACTAATGTAGTTGAAGGAACTTCAAAGATATCTGTTACCTTGGATGATGGCAAGGTGAAGGCCTTGGAGCTCCGTAAGCAAGGAGTCCGTTTTGTTCCTCAAAAGCAAAAAAGATCAAAAGCTTGA 2613 0.429 MAFHVACPITCRRICFCSLGFPRALHTSKAKHEFLDDVARIDEFLKDPLGIRASERERTVQVAVPKVEPPPQRQLQSTPAADGVPVVDEVDEAVSTKAKMVALQRKGAAAMIAAEEYARQFESADAVDAYGNLAGEENGNLNVKVFCRMCNRVENEGSERAKKMLSCKSCGKKYHRTCLKSWAQHRDLFHWSSWTCRACRICEACRRTGDPSKFMFCKRCDGAYHCYCLHPPHKNVSSGPYLCSKHTRCHSCGSNVPGNGLSVRWFLGYTCCDACGRLFVKGNYCPVCLKVYRDSESTPMVCCDVCQRWVHCQCDNIRLEKFCSDEKYLQFQVDGNLQYKCPTCRGECYQVKDLEDAVKELWKRRDIADRDLIASLRAAAALPTQEEIFSISPYSDDEDSEPVKAKSESVRSFKFSLKNFSDNSPKKTKDYAKKCSSKKRSKKKDYQTGKTDPSLEGHSDVKSVHSLDDDIQSHRQEGPDVYSSPAGGSLSQTEGYANQPGILKQKFVDEVMISDEERKLRVVRIKSSKAQTLDSEEEAGKSGDKNQNVKGKKLVINFGARKINATNSPRSDTSSCQRDQDLVSTNGNEDIRQSGKGDKFMLDRHDGTARNADGKGNRVDSHQSKDLKVSGREGNLIKPAKVKPEVSELNSASVRSNIADGSESGPIERPRILIGKRRTEGKTGQDGTAQTTSQGERMFLVKQSEGRSDAYDETDDNANHIPSHSLPKDPKPLLRLKFKKPSIESQNSLHLEDERITIKGQRSKRKRPSPFMEKMSNNEDEDVAQSHQDGPIDEIMDANWILMKLGKDAIGKRVEIHKSSDNSWHKGSVTNVVEGTSKISVTLDDGKVKALELRKQGVRFVPQKQKRSKA 870
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele31g0201 870 MobiDBLite consensus disorder prediction 746 788 - -
Lele31g0201 870 CDD PHD_SF 146 199 - -
Lele31g0201 870 SUPERFAMILY FYVE/PHD zinc finger 137 202 IPR011011 -
Lele31g0201 870 MobiDBLite consensus disorder prediction 423 504 - -
Lele31g0201 870 MobiDBLite consensus disorder prediction 561 591 - -
Lele31g0201 870 MobiDBLite consensus disorder prediction 525 732 - -
Lele31g0201 870 FunFam PHD finger family protein 279 347 - -
Lele31g0201 870 SUPERFAMILY FYVE/PHD zinc finger 191 252 IPR011011 -
Lele31g0201 870 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 279 347 IPR013083 -
Lele31g0201 870 MobiDBLite consensus disorder prediction 702 719 - -
Lele31g0201 870 FunFam PHD finger family protein 141 256 - -
Lele31g0201 870 SUPERFAMILY FYVE/PHD zinc finger 283 348 IPR011011 -
Lele31g0201 870 MobiDBLite consensus disorder prediction 592 632 - -
Lele31g0201 870 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 140 256 IPR013083 -
Lele31g0201 870 SMART PHD_3 201 247 IPR001965 -
Lele31g0201 870 SMART PHD_3 284 345 IPR001965 -
Lele31g0201 870 SMART PHD_3 146 200 IPR001965 -
Lele31g0201 870 MobiDBLite consensus disorder prediction 745 791 - -
Lele31g0201 870 MobiDBLite consensus disorder prediction 525 548 - -
Lele31g0201 870 ProSitePatterns Zinc finger PHD-type signature. 147 199 IPR019786 -
Lele31g0201 870 MobiDBLite consensus disorder prediction 485 499 - -
Lele31g0201 870 MobiDBLite consensus disorder prediction 684 699 - -
Lele31g0201 870 PANTHER HL01030P-RELATED 53 604 - -
Lele31g0201 870 ProSiteProfiles Zinc finger PHD-type profile. 144 202 IPR019787 -
Lele31g0201 870 MobiDBLite consensus disorder prediction 445 476 - -
Lele31g0201 870 ProSiteProfiles Zinc finger PHD-type profile. 282 347 IPR019787 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele31g0201 Lele-ChrLele31 1988351 1996923 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele29g1376 29 20487620 20496927 Lele31g0201 31 1988351 1996923 hybridization
Lele30g0181 30 1827493 1834700 Lele31g0201 31 1988351 1996923 hybridization