Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele29g1376 ATGGCATTTCACGTTGCTTGCCCAATTACATGTCGCCGAATCTGCTTCTGCTCGCTAGGGTTTCCTCGCGCCCTTCATACATCGAAGGCCAAGCATGAGTTCCTTGACGATGTGGCAAGAATCGATGAGTTTCTCAAGGATCCTTTGGGAATTAGGGCTTCAGAAAGGGAACGGACCGTGCAAGTCGCAGTTCCTAAGGTTGAGCCGCCGCCGCCGCCGCCTCAGCGGCAGTTGCAGTCAACACTGGCGGCTGATGGGGTCCCAGTTGTCGATGAGGTGGACGAGGCAGTGTCAACTAAGGCTAAGAGGGTCGCGTTGCAGCGGAAGGGGGCTGCCGCGATGATTGCTGCCGAGGAGTACGCCCGTCAGTTTGAGTCCGCCGATGCGGTGGATGCATATGGGAATCTTGCTGGAGAAGAGAATGGTAATTTGAATGTCAAAGTATTTTGCCGAATGTGCAATCGTGTTGAAAATGAGGGAAGTGAAAGGGCTAAAAAAATGCTCTCTTGCAAAAGTTGTGCCAAGAAGTACCATAGGACCTGCTTAAAAAGTTGGGCTCAACATAGAGATTTATTTCATTGGAGTTCATGGACTTGTCGTGCTTGCCGAATTTGTGAGGTGTGTAGAAGGACAGGAGATCCAAGTAAGTTCATGTTTTGTAAAAGGTGTGATGGTGCTTATCATTGTTATTGTCTCCATCCTCCTCACAAGAATGTTAGTTCTGGGCCTTATTTGTGCTCAAAACATACAAGGTGTCACAGCTGTGGATCCAGTGTTCCTGGAAATGGTCTAAGTGTGAGGTGGTTTCTGGGATACACCTGCTGTGATGCATGTGGAAGATTGTTTGTGAAAGGAAACTACTGTCCTGTTTGTCTGAAGGTTTATAGAGATTCAGAATCGACACCAATGGTTTGCTGTGATGTTTGCCAGCGTTGGGTGCACTGCCAGTGTGATGATATAAGTGATGAAAAATATCTTCAATTTCAAGTGGATGGGAATTTGCAGTATAAATGCCCCACTTGTCGTGGGGAATGTTATCAGGTCAAGGATCTTGAGGATGCTGTTAAAGAACTTTGGAAGAGAAGAGATATTGCTGACAGAGATTTAATTGCCAGCTTGAGGGCTGCAGCTGGTTTACCGACTCGAGAAGAAATATTTTCTATTTCACCATATTCAGATGATGAGGATAGTGAGCCTGTAAAAGCAAAGAGTGAATCTGTGCGATCTTTTAAGTTCTCTCTGAAGAATTTCTCTGATAATTCACCAAAGAAGACAAAAGATTATGCAAAGAAATGTTCAAGTAAAAAGCGTTCCAAGAAAAAGGACTATCAGACTGGTAAAACTGATCGAAGTTTGGAAGGACATAGTGATGTCAAATCTGTGCATAGCTTGGATGATGATATCCAATCGCACAGACATGAAGTTCCTGATGTTTATTCTTCACCTGCTGGTGGAAACCTGAGTCAAACTGAAGGTTATGCTAATCAGCCAGGGATTTTGAAACAGAAGTTTGTAGATGAGGTGATGATCAGTGATGAAGAGAGAAAACTTAGAGTTGTTCGAATTAAGAGCAGCAAGGCTCAAACTCTCGATAGTGAAGAGGAGGCTGGAAAAAGTGGTGATAAGAATCAGAATGTAAAGGGAAAGAAGTTGGTTATAAATTTTGGGGCACGGAAAATTAATGTGACTAATTCTCCACGGTCTGATACTTCAAGTTGCCAAAGAGATCAAGATCTTGTTAGCACTAATGGCAATGAAGATATTAGCCAATCAGGGAAAGGAGACAAGTTTATGTTAGACAGACATGATGGCACAGCTAGAAATGCTGATGGTAAAGGAAACAGAGTTGATTCTCGTCAATCAAAAGATTTAAAGGTTTCAGGTAGAGAAGGAAATTTGATAAAGCCTGCAAAAGTTAAGCCAGAAGTTTCTGAATTAAACTCGGCATCTGTTAGAAGCAATATTGCTGATGGGACTGAATCTGGTCCCATAGAGCGACCTCGTATCTTGATTGGAAAGCGCCGCACTGAGGAAAAGACTGGTCAAGATGGAACTGTTCAAATTACGTCACAAGGTGAGAGGATGCTTTTGGGGAAGCAGTCAGAAGTCAGGTCTGATGCATACGATGAGACAGATGACAATGCTAATCATATACCATCACATTCTTTGCCAAAAGACCCTAAACCTTTATTGAGATTGAAATTTAAGAAATCTAGGATTGAAAGTCAAAATTCTCTTCATCTTGAGGATGAGAAGATTACAATCAAGGGACAGAGGTCAAAAAGGAAAAGGCCTTCTCCTTTTATGGAGAAAATGTCGATCAATGAGGATGAAGATATTGCACAATCGCATCAAGATGGTCCAATAGATGAAATCATGGATGCTAATTGGATACTGATGAAATTGGGTAAAGATGCCATTGGAAAGAGAGTTGAAATTCACAAGTCATCTGACAATTCTTGGCACAAGGGATCGGTCACTAATGTAATTGAAGGAACTTCAAAGATATCTGTTACCTTGGAGGATGGCAAGGTGAAGGCCTTAGAGCTCCGTAAGCAAGGAGTCCGTTTTGTTCCTCAAAAGCAAAAAAGATCAAAAGCTTGA 2604 0.4259 MAFHVACPITCRRICFCSLGFPRALHTSKAKHEFLDDVARIDEFLKDPLGIRASERERTVQVAVPKVEPPPPPPQRQLQSTLAADGVPVVDEVDEAVSTKAKRVALQRKGAAAMIAAEEYARQFESADAVDAYGNLAGEENGNLNVKVFCRMCNRVENEGSERAKKMLSCKSCAKKYHRTCLKSWAQHRDLFHWSSWTCRACRICEVCRRTGDPSKFMFCKRCDGAYHCYCLHPPHKNVSSGPYLCSKHTRCHSCGSSVPGNGLSVRWFLGYTCCDACGRLFVKGNYCPVCLKVYRDSESTPMVCCDVCQRWVHCQCDDISDEKYLQFQVDGNLQYKCPTCRGECYQVKDLEDAVKELWKRRDIADRDLIASLRAAAGLPTREEIFSISPYSDDEDSEPVKAKSESVRSFKFSLKNFSDNSPKKTKDYAKKCSSKKRSKKKDYQTGKTDRSLEGHSDVKSVHSLDDDIQSHRHEVPDVYSSPAGGNLSQTEGYANQPGILKQKFVDEVMISDEERKLRVVRIKSSKAQTLDSEEEAGKSGDKNQNVKGKKLVINFGARKINVTNSPRSDTSSCQRDQDLVSTNGNEDISQSGKGDKFMLDRHDGTARNADGKGNRVDSRQSKDLKVSGREGNLIKPAKVKPEVSELNSASVRSNIADGTESGPIERPRILIGKRRTEEKTGQDGTVQITSQGERMLLGKQSEVRSDAYDETDDNANHIPSHSLPKDPKPLLRLKFKKSRIESQNSLHLEDEKITIKGQRSKRKRPSPFMEKMSINEDEDIAQSHQDGPIDEIMDANWILMKLGKDAIGKRVEIHKSSDNSWHKGSVTNVIEGTSKISVTLEDGKVKALELRKQGVRFVPQKQKRSKA 867
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele29g1376 867 MobiDBLite consensus disorder prediction 562 590 - -
Lele29g1376 867 SUPERFAMILY FYVE/PHD zinc finger 194 255 IPR011011 -
Lele29g1376 867 MobiDBLite consensus disorder prediction 442 461 - -
Lele29g1376 867 ProSiteProfiles Zinc finger PHD-type profile. 147 205 IPR019787 -
Lele29g1376 867 ProSitePatterns Zinc finger PHD-type signature. 150 202 IPR019786 -
Lele29g1376 867 MobiDBLite consensus disorder prediction 524 549 - -
Lele29g1376 867 SMART PHD_3 149 203 IPR001965 -
Lele29g1376 867 SMART PHD_3 287 342 IPR001965 -
Lele29g1376 867 SMART PHD_3 204 250 IPR001965 -
Lele29g1376 867 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 282 344 IPR013083 -
Lele29g1376 867 SUPERFAMILY FYVE/PHD zinc finger 285 343 IPR011011 -
Lele29g1376 867 SUPERFAMILY FYVE/PHD zinc finger 140 205 IPR011011 -
Lele29g1376 867 PANTHER HL01030P-RELATED 54 603 - -
Lele29g1376 867 MobiDBLite consensus disorder prediction 562 667 - -
Lele29g1376 867 MobiDBLite consensus disorder prediction 593 629 - -
Lele29g1376 867 FunFam PHD finger family protein 282 344 - -
Lele29g1376 867 MobiDBLite consensus disorder prediction 420 461 - -
Lele29g1376 867 ProSiteProfiles Zinc finger PHD-type profile. 285 344 IPR019787 -
Lele29g1376 867 FunFam PHD finger family protein 144 259 - -
Lele29g1376 867 MobiDBLite consensus disorder prediction 524 545 - -
Lele29g1376 867 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 143 259 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele29g1376 Lele-ChrLele29 20487620 20496927 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele29g1376 29 20487620 20496927 Lele31g0201 31 1988351 1996923 hybridization
Lele29g1376 29 20487620 20496927 Lele32g1209 32 13058987 13066271 hybridization