Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele30g1270 ATGGCGGCCACGAGCCCCTCCTTCTCTCCTCACCGATCCTCTCTTTTAGAATTCCCCAGAACCAATCGCCCTCTTCCTCCCTTCTCCGTTCGTTTCTCCGCCAAGAGTCATGGAGCCTCTGTTTCCCCCACGTGCGACGACCTCGCCCAGGGACCTCACTGCATCTACGTTGGCCCCATCGAGTCCGCCAGCCAAGAAATCCTCGAAGCTCTTTATCTCCAAGCGCGGGATGCGTATTACAGTGGAAAGCCTTTGATAGTTGACGACATGTTTGATAGGGTAGAGTTAAAGCTGCGGTGGTATGGTTCGAAATCTGTAGTTAAATATCCTCGTTGCAGTATCAGGAGGCAATCAACATATGCTGATGCTGAGGCAGATCTGTCTATGATTTTTGCATTAGCCAGCACGTGGATCGTCTTCCTTGCATTTGGCAGCACAATATGCGCCGGGCCTGTATTGTACACTGTCAGCATGGCTTATCATACTGCATTCAATTCCGGATTATCCTCTGTCAACCAAGCATCCGGACTAGGATTTCTGGCCACGGTGAATAGCATTGTGTTCATGACATTGGGCTGTATCATTGGCTATCCAGTTGCATCCGCTTCAGTTAAGGTGCTTCAAGGCCTGTGGCGGAATGACTTGGTGGCACTAAAAGGCGCGTGTCCAAATTGTGGAGAAGAGGTATTCGCATTTGTGAGAATGGACAGGGCTAGTGATTCTCCCCACAGAGCAGATTGTCACGTGTGCGGATGCTTATTAGAATTTCACACCCATGTCGAGGAATCGGTCTCAAGACTGGGAAGAAAATGGGTTTACGGGCGTATTTACCTCGTTTCGCTCAGAGGCAGATCCCAGCGCCAAAGACGGTTGTAA 876 0.5023 MAATSPSFSPHRSSLLEFPRTNRPLPPFSVRFSAKSHGASVSPTCDDLAQGPHCIYVGPIESASQEILEALYLQARDAYYSGKPLIVDDMFDRVELKLRWYGSKSVVKYPRCSIRRQSTYADAEADLSMIFALASTWIVFLAFGSTICAGPVLYTVSMAYHTAFNSGLSSVNQASGLGFLATVNSIVFMTLGCIIGYPVASASVKVLQGLWRNDLVALKGACPNCGEEVFAFVRMDRASDSPHRADCHVCGCLLEFHTHVEESVSRLGRKWVYGRIYLVSLRGRSQRQRRL 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele30g1270 291 MobiDBLite consensus disorder prediction 1 16 - -
Lele30g1270 291 MobiDBLite consensus disorder prediction 1 20 - -
Lele30g1270 291 PANTHER PGR5-LIKE PROTEIN 1B, CHLOROPLASTIC 69 280 IPR039987 GO:0009535|GO:0009773|GO:0016730
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele30g1270 Lele-ChrLele30 15267675 15269651 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele09g1249 09 21323614 21326296 Lele30g1270 30 15267675 15269651 CCT
Lele10g1225 10 23343765 23347398 Lele30g1270 30 15267675 15269651 CCT
Lele30g1270 30 15267675 15269651 Lele31g1421 31 19822838 19824523 hybridization
Lele30g1270 30 15267675 15269651 Lele32g0126 32 711824 714428 hybridization