Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele30g1227 ATGGATAATGAATTGCTTGAGTTGCAAAGACAATTCGAGTTCGCACAGCAGGCAAAGTCGAATATTCGATTATCGGAGCGAAACGTTGTTGAATTGGTTCAGAAATTGCAGGAGCTTCATATCATTGGTTTCGATCTTCTTCACACCGTTTCTGGCAAAGAGTACATCACTCCCGAGCAACTGAGGAATGAGATGGTGGCTGAAATTAAGAAGCTAGGGCGTGTTTCTCTGATTGATCTCGCTGATGCTACTGGAGTCGATTTATACCATGTTGAGAAGCAGGCGCAACAAGTTATAAAAGATCATCCGAAGATGATGTTAGTTCAAGGGGAAATTGTGTTAGAATCTTATTGGGATTCGATAGCTGAAGAAATTAATGAGAGGCTTCAGGAATGTAGTCAGATTGCGCTTACAGAACTTGCTGCACAATTGAATGTTGGTCTAGAATTGGTTGCCTCCATGTTGGAGCCTCGTCTCGGAACGATGGTGAAGGGAAGGCTCGAAGGTGGGCAGTTGTATACTCCTGCATATGTAGCTCGTGTTGGTGCCATGGTTCGAGGTGCTGCCAGAGGCATCACTGTTCCGACAAATTTGTCATTGGTATGGAGCTTGTTACAGCAATTACTGCAAGAAATGGATGGAACCAGCAGTGTGGTTGTTGAAGGAGCTTTCTTCCAGTCACTTTTTAACGGGCTTGTGAAGGAAAGTGAGATTCTAGGATCACTTCGTGCTGGAATACATTGGACACCTGCGGTCTTTGCCATTGCTCAAAAGGAATCTGTGGATTCATTCTTTTCACAGAATTCTTTTATTAGCTATGACGTTCTACAGAAACTTGGAATTCCCCAGCCCGTTCAATTCTTGCAGTCCAGATATCCTGAAGGTATACCTCTAGATACAATGTTTGTCCACCCATCAATGATCGAAATGCTGGATTCTGCTACTGAGGATGCTCTTGAGCGTGGTAGCTGGAGTGATGCTCTTTCTTTATTGCCTTCATCCTTCACTCCTCAAGATGCATCTAAAATGTTGACCTTCTGCCAATCTGTTCAATCTGCTCTTAAGTCTAATAAAGCACACATTTTTGGGGATTTTTATATTTTGAGCAACAGCTTTATGAAGGGCATCTGTGAGCACTTGGTGAAAGAAATGGAAACATTAGGTGTTTCAGGGTCATCTGGCATTAAAATGTTTAGTGATTCACAAGTAGCGAATGAAGCAAAAGTTGGGCAGGACTTAATTCGATCAAATGAGTCAAATAAAACCGCAACAGATGGCAGTGCCGCTAAACATGTTGATGGAGGATCGAAGAAGAAAAAGGGAAGGGCTACTGGGAATGCAGCAGCAAATGTGTCTGACAGTGCTGCAGATATTCTGGAACGGACTTCCACAAAATCTAAAAGAAGCCAGAGAAGGGGCAAGGATACATCTTCCTCACAAATTTCAGATTCAAAAATAGGTTCTAGGAAAGAATCACTTAAAACGAAGGAGGATAATCTCAGCAGTCCTTTAGATGAGTGGATTATGCAGAAGATTATGACTTTGGTTCCTGATTTTGAAGAACAATGCATGGATGATCCTGTAACAATTCTGAGGCCTTTGTCTAATCATTTAAGGCCTACAATAATGGCTTCTTGGATGGAGAAGAAGAAAGCATTGTTTACAGAAAATGCAGAAAGAATGAAATCTTTGCTTGATAATTTGCAAAAGAAACTTGACGAGTCTTTCTTAAACATGCAGCTTTATGAAAAAGCTTTAGAATTGTTTGAAGATGATCATTCAACCTCCGTTGTTTTGCACAGGCATTTATTGAGAACAGTAGCTGCCCCTATGGTGGATATGCTTCTTCGTAAGTTGGATGAGCACAACAAGTTAAAGAGCGGGCTTGAAGTGGAGGAAGCATCAAATTCAGAACTACTCACACTTAGTCCTGGAGACAGAGCTGCAATTTCGAAGAGTTTACCAGGAGCGCTTGGTAAAAAAGCTCTTGGTGTTGTTGAAGCATTGGAAGGAAAGCGTGTGGAAACGTTTATGGATGCTTTTAGAGAGGTAGCAGAAGAGAGTGGGTTGTCTTTGAAAAAGCTTGACAAGAAACTAGAAAGAACACTTTCACACTCATATCGTAAGGAATTGACATCTCAAATTTCTATCGAGACTGATCCAGTATCACTTCTGACCAAAGTCGTGTCTTTACTTTACGTGCAGGTTTACCACAAAGCTCTTCAAGCCCCGGGAAGGGCCATTTCTGTCGCCATCTCCCAACTGAAGGACAAGTTAGATGAGCCGTCATTCAAGATTTTAACTGATTATCAGAGCGCTACAGTGACTCTTCTGGCATTATTAGCAGCTGCAACCGGCGATGACGAGGATTGTTCATCTGATAGAATATTGAGCAAAAGGGAGGTTTTGGAGAGCCAAATGCCAGCTCTGAAAAGCTTGGTCTTGAGCACCTCGCAATCGTCATAG 2466 0.4213 MDNELLELQRQFEFAQQAKSNIRLSERNVVELVQKLQELHIIGFDLLHTVSGKEYITPEQLRNEMVAEIKKLGRVSLIDLADATGVDLYHVEKQAQQVIKDHPKMMLVQGEIVLESYWDSIAEEINERLQECSQIALTELAAQLNVGLELVASMLEPRLGTMVKGRLEGGQLYTPAYVARVGAMVRGAARGITVPTNLSLVWSLLQQLLQEMDGTSSVVVEGAFFQSLFNGLVKESEILGSLRAGIHWTPAVFAIAQKESVDSFFSQNSFISYDVLQKLGIPQPVQFLQSRYPEGIPLDTMFVHPSMIEMLDSATEDALERGSWSDALSLLPSSFTPQDASKMLTFCQSVQSALKSNKAHIFGDFYILSNSFMKGICEHLVKEMETLGVSGSSGIKMFSDSQVANEAKVGQDLIRSNESNKTATDGSAAKHVDGGSKKKKGRATGNAAANVSDSAADILERTSTKSKRSQRRGKDTSSSQISDSKIGSRKESLKTKEDNLSSPLDEWIMQKIMTLVPDFEEQCMDDPVTILRPLSNHLRPTIMASWMEKKKALFTENAERMKSLLDNLQKKLDESFLNMQLYEKALELFEDDHSTSVVLHRHLLRTVAAPMVDMLLRKLDEHNKLKSGLEVEEASNSELLTLSPGDRAAISKSLPGALGKKALGVVEALEGKRVETFMDAFREVAEESGLSLKKLDKKLERTLSHSYRKELTSQISIETDPVSLLTKVVSLLYVQVYHKALQAPGRAISVAISQLKDKLDEPSFKILTDYQSATVTLLALLAAATGDDEDCSSDRILSKREVLESQMPALKSLVLSTSQSS 821
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele30g1227 821 MobiDBLite consensus disorder prediction 413 499 - -
Lele30g1227 821 Coils Coil 15 35 - -
Lele30g1227 821 PANTHER E3 UFM1-PROTEIN LIGASE 1 2 820 IPR018611 GO:0061666|GO:0071569
Lele30g1227 821 MobiDBLite consensus disorder prediction 460 474 - -
Lele30g1227 821 Pfam E3 UFM1-protein ligase 1 4 288 IPR018611 GO:0061666|GO:0071569
Lele30g1227 821 Coils Coil 612 632 - -
Lele30g1227 821 Coils Coil 551 585 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele30g1227 Lele-ChrLele30 14995028 15000955 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele30g1227 1 787 EF-hand Containing Proteins AT3G46220 63.405 0.0 970
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele30g1227 30 14995028 15000955 Lele31g1374 31 19559545 19565453 hybridization
Lele30g1227 30 14995028 15000955 Lele32g0169 32 976430 982265 hybridization