Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele32g0169 ATGGATAATGAATTGCTTGAGTTGCAAAGACAATTCGAGTTCGCACAGCAGGCAAAGTCGAATATTCGATTATCGGAGCGAAACGTTGTTGAATTGGTTCAGAAATTGCAGGAGCTTCATATCATTAATTTCGATCTTCTTCACACCGTTTCTGGCAAAGAGTACATCACTCCCGAGCAACTGAGCAATGAGATGGTGGCTGAAATTAAGAAGCTAGGGCGTGTTTCTCTGATTGATCTCGCTGATGCTACTGGAGTCGATTTATACCATGTTGAGAACCAGGCGCAACAAGTTATAAAAGATCATCCGAACATGATGTTAGTTCAAGGGGAAATTATGTCAGAATCTTATTGGGATTCGATAGCTGAAGAAATTAATGAGAGGCTTCAGGAATGTAGTCAGGTTGCGCTTACAGAACTTGCTGCACAATTGAATGTTGGTCTAGAATTGGTTGCCTCCATGTTGGAGCCTCGTCTCGGAACGATGGTGAAGGGAAGGCTCGAAGGTGGGCAGTTGTATACTCCTGCATATGTAGCCCGTGTTGGTGCCATGGTTCGAGGTGCTGCCAGAGGCATCACTGTTCCGACAAATTTGTCATTGGTATGGAGCTTGTTACAGCAATTACTGCAAGAAATGGATGGAACCAGCAGTGTGGTTGTTGAAGGAGCTTTCTTCCAGTCACTTTTTAACGGGCTTGTGAAGGAAAGTGAGATTCTAGGATCACTTCGTGCTGGAATACATTGGACACCTGCGGTCTTTGCCATTGCTCAAAAGGAATCTGTGGATTCACTCTTTTCACAAAATTCTTTTATTAGCTATGACGTTATACAGAAACTTGGAATTCCCCAGCCCGTTCAATTGTTGCAGTCCAGATATCCTGAAGGTATACCTCTAGATACAATGTTTGTCCACCCATCAATGATCGAAATGCTGGATTCTGCTACTGAGGATGCCCTTGAGCGTGGTAGCTGGAGTGATGCTCTTTCCTTATTGCCTTCATCCTTCACTCATCAGGATGCATCTAAAATGTTGACCTTCTGCCAATCTGTTCAATGTGCTCTTAAGTCTAATAAAGCACACATTTTTGGGGATTTTTATATTTTGAGCAACAGCTTTATGAAGGGCATCTGTGAGCACTTGGTGAAAGAAATGGAAACGTTAGGTGCTTCAGGGTCATCTGGCATTAAAATGTTTAGTGATTCACAATCAAATGAGTCAAATGAAACTGCAACAGATGGCAGTGCCGCAAAACATGTAGATGGAGGATCAAAGAAGAAAAAGGGAAGGGCTACTGGGAATGCAGCAGCAAATGTGTCTGACAGTACTGCAGATATTCTGGAACAGACTTCCACAAAATCTAAAAGAAGCCAGAGAAGGGGCAGGGATACATCTGCCTCACAAGTTTCAGGTTCAAAAATAGGTTCTAGGAAAGAATCACTTAAAACGAAGGAGGATAACCTCAGCAGTCCTTTAGATGAGTGGATTATGCAGAAGATTATGACTTTGGTTCCTGATTTTGAAGAACAATGCGTGGATGATCCAGTAACAATTCTGAGGCCTTTGTCTAATCATTTAAGGCCTACAATAATGGCTTCTTGGATGGAGAAGAAGAAAGCATTGTTTACAGAAAATGCAGAAAGAATGAAATCTTTGCTTGATAATTTGCAAAAGAAACTTGACGAGTCTTTCTTAAACATGCAGCTTTATGAAAAAGCTTTAGAATTGTTCGAAGATGATCATTCAACCTCCGTTGTTTTGCACAGGCATTTATTGAGAACAGTAGCTGCCTCTATGGTGGATATGCTTCTTCATAAGTTGGATGAGCACAACAAGTTAAAGAGCGGGCTTGAAGTGGAGGAAGCATCAAATTCAGAACTACTCACACTTAGTCCTGGAGACAGAGCTGCAATTTCGAAGAGTTTACCAGGAGCGCTTGGTAAAAAAGCTCTTGGTATTGTTGAATCATTGGAAGGAAAGCGGGTGGAAACGTTTATGGATGCTTTTAGAGAGGTAGCAGAAGAGAGTGGGTTGTCTTTGAAAAAACTTGACAAGAAACTAGAAAGAACACTTTTACTCTCATATCGTAAGGAATTGACATCTCAAATTTCTATCGAGACTGATCCAGTATCACTTCTGGCCAAAGTCGTGTCTTTACTTTACGTGCAGGTTTACCACAAAGCTCTTCAAGCCCCGGGAAGGGCGATTGCTGTCGCCACCTCCCAACTGAAGGACAAGTTAGATGAGTCGTCATTCAAGATTTTAACTGATTATCACAGCGCTACAGTGACTCTTCTGGCATTATTAGCAGCTGCAACCGGCGATGACGAGGATTGTTCATCTGATAGAATATTGAGCAAAAGGGAGCTTTTGGAGAGCCAAATGCCAGCTCTGAAAAGCTTGGTCTCGAGCACCTAG 2415 0.4228 MDNELLELQRQFEFAQQAKSNIRLSERNVVELVQKLQELHIINFDLLHTVSGKEYITPEQLSNEMVAEIKKLGRVSLIDLADATGVDLYHVENQAQQVIKDHPNMMLVQGEIMSESYWDSIAEEINERLQECSQVALTELAAQLNVGLELVASMLEPRLGTMVKGRLEGGQLYTPAYVARVGAMVRGAARGITVPTNLSLVWSLLQQLLQEMDGTSSVVVEGAFFQSLFNGLVKESEILGSLRAGIHWTPAVFAIAQKESVDSLFSQNSFISYDVIQKLGIPQPVQLLQSRYPEGIPLDTMFVHPSMIEMLDSATEDALERGSWSDALSLLPSSFTHQDASKMLTFCQSVQCALKSNKAHIFGDFYILSNSFMKGICEHLVKEMETLGASGSSGIKMFSDSQSNESNETATDGSAAKHVDGGSKKKKGRATGNAAANVSDSTADILEQTSTKSKRSQRRGRDTSASQVSGSKIGSRKESLKTKEDNLSSPLDEWIMQKIMTLVPDFEEQCVDDPVTILRPLSNHLRPTIMASWMEKKKALFTENAERMKSLLDNLQKKLDESFLNMQLYEKALELFEDDHSTSVVLHRHLLRTVAASMVDMLLHKLDEHNKLKSGLEVEEASNSELLTLSPGDRAAISKSLPGALGKKALGIVESLEGKRVETFMDAFREVAEESGLSLKKLDKKLERTLLLSYRKELTSQISIETDPVSLLAKVVSLLYVQVYHKALQAPGRAIAVATSQLKDKLDESSFKILTDYHSATVTLLALLAAATGDDEDCSSDRILSKRELLESQMPALKSLVSST 804
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele32g0169 804 MobiDBLite consensus disorder prediction 395 413 - -
Lele32g0169 804 MobiDBLite consensus disorder prediction 395 486 - -
Lele32g0169 804 PANTHER E3 UFM1-PROTEIN LIGASE 1 2 803 IPR018611 GO:0061666|GO:0071569
Lele32g0169 804 Coils Coil 538 572 - -
Lele32g0169 804 Coils Coil 15 35 - -
Lele32g0169 804 Pfam E3 UFM1-protein ligase 1 4 287 IPR018611 GO:0061666|GO:0071569
Lele32g0169 804 MobiDBLite consensus disorder prediction 434 450 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele32g0169 Lele-ChrLele32 976430 982265 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele32g0169 1 774 EF-hand Containing Proteins AT3G46220 63.824 0.0 967
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele29g0180 29 1011532 1017412 Lele32g0169 32 976430 982265 hybridization
Lele30g1227 30 14995028 15000955 Lele32g0169 32 976430 982265 hybridization